Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_I21
(1223 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 52 2e-07
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 40 5e-04
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 40 0.001
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 39 0.001
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 38 0.003
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 36 0.009
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 36 0.011
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 36 0.015
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 33 0.11
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 32 0.14
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 32 0.14
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.19
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 31 0.25
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 0.99
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 29 0.99
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 27 4.0
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 27 5.3
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 27 7.0
SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces ... 27 7.0
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 26 9.3
SPAC2F7.05c |||translation initiation factor eIF5 |Schizosacchar... 26 9.3
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 9.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 9.3
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 51.6 bits (118), Expect = 2e-07
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 507 LGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGG 686
+GS Y P VG + GRK +L IC+ AL ++ + +V R I G
Sbjct: 136 IGSAYVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQG 195
Query: 687 LSKAN-VSLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPLCG 818
L +SL I++D + +TR ++ A+ A + GP+ G
Sbjct: 196 LGGGGIISLVNIIISDITPLRTRPMYSGILATAWGAALVAGPIIG 240
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 40.3 bits (90), Expect = 5e-04
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 303 IAFVFLSLLLDLFAFTMILPLLP-SLMDYYSREENQENSLYSTLLQAVRSFQKLTGAPDR 479
I + ++L DLF + +I P+LP SL+D ++ S+ STLL +P
Sbjct: 17 IGTIAIALFTDLFLYGIITPILPFSLVDRVGISPDRVQSVISTLLAVYAVANIAASSPIG 76
Query: 480 FVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLIC--LTGIAASHALWSLAETF 653
F++ F M L FLTS +L PML++ L G++A+ +W++
Sbjct: 77 FLADKFLTRKVPMLIGLIFLTS--ATALLTFGNSVPMLIVARVLQGLSAA-VVWTVGLAL 133
Query: 654 LIFVV 668
L+ VV
Sbjct: 134 LVDVV 138
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 468 APDRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAY-GRKPMLLICLTGIAASHALWSLA 644
+PDR SV+ L ++Y+ S +G L+D + RK +LI L + ++ AL +
Sbjct: 49 SPDRVQSVI--STLLAVYAVANIAASSPIGFLADKFLTRKVPMLIGLIFLTSATALLTFG 106
Query: 645 ETFLIFVVARFIGGLSKANV-SLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPLCG 818
+ + +VAR + GLS A V ++ +A++ D M + S+ I+ P+ G
Sbjct: 107 NSVPMLIVARVLQGLSAAVVWTVGLALLVDVVGADNVGSTMGGIFGFISLGEIIAPVFG 165
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 39.5 bits (88), Expect = 0.001
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 504 ALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAET-------FLIF 662
A GS+ +FL ++ G++ D YGR+ +L I ++ + LW L ++ F++F
Sbjct: 191 AFGSLAAFLGLFSTAYYGTMGDIYGRRLVLFITVSFLLLGD-LWLLYQSYAPKHPYFVLF 249
Query: 663 VVA-RFIGGLSKANVSLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGP 809
A + +GG V+ + V D S + RA + L A+ + +GP
Sbjct: 250 AAALKGLGGYISTVVASQNSFVADCSKTEFRAWYLGLNFAAYHLGTALGP 299
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 507 LGSMYSFLQFLTSPIVGS-LSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIG 683
LG+ + + P++ S LS+ YGR+P+ + T A +L+ +FVV RF
Sbjct: 79 LGATLYVIGVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFS 138
Query: 684 G-LSKANVSLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKTS 839
G + + ++D +++ R + + + L + + P+ + A +S
Sbjct: 139 GFFGSVGLGIGAGSLSDMFSKRDRGKYIGIYFLGICLGPAIAPIASGFIAGSS 191
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 546 PIVGSLSDAYGRKPMLL--ICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMA 719
P+ G D YGRK LL C+ GI L + + V AR I G+ ++ ++
Sbjct: 142 PLFGKFCDIYGRKKTLLAAYCVFGIGC--FLCGTSRSLWQLVAARAIAGIGGGGMNSTVS 199
Query: 720 I-VTDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFA 830
I ++D K R ++ + F++ +G G +FA
Sbjct: 200 ILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGYFA 237
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +3
Query: 507 LGSMYSFLQFLTSPIVGS-LSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIG 683
LG F + PI+ + +S+ GRK L++ + + ++A+ ++ RF
Sbjct: 137 LGMSLYVCGFASGPILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFS 196
Query: 684 GLSKAN-VSLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKT 836
G ++ +S+ A D KTR + + ++GP+ G + AK+
Sbjct: 197 GFCASSPLSVVAAAFADMFDNKTRGPAVCIFACITFAGPLIGPIAGGFLAKS 248
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 35.9 bits (79), Expect = 0.011
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 528 LQFLTSPIVGS-LSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANV 704
L + PI + +S+ GRK L I L + + A+ ++ RF GG A V
Sbjct: 185 LGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGYG-ACV 243
Query: 705 SLCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPL 812
LC+ A R RG A+ F+ VGPL
Sbjct: 244 PLCVVAAAFADMYPNRYRGTAIT--IFAAVIFVGPL 277
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 35.5 bits (78), Expect = 0.015
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 534 FLTSPIVGS-LSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGG-LSKANVS 707
++ PIV + LS+ GRK LLI + G + ++A+ ++ RF G + A ++
Sbjct: 183 YIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCRFFSGFFASAPLT 242
Query: 708 LCMAIVTDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKT 836
+ A D + K R + + +V P+ G + K+
Sbjct: 243 VVAAAFADMYSNKHRGTAITIFAALVFDGPLVSPIIGGFLTKS 285
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 32.7 bits (71), Expect = 0.11
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 549 IVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAI-V 725
I G+L+D +GRKP++ I I + A +V RF+ G SL + + +
Sbjct: 146 IAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYL 205
Query: 726 TDASTEKTRARGMALVGLAFSVAFIV 803
++ + K R R + + L + ++
Sbjct: 206 SEIAPSKIRGRLVIIYVLLITAGQVI 231
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 32.3 bits (70), Expect = 0.14
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 549 IVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKAN-VSLCMAIV 725
++ LS+ GR+ + L+ L +LA ++ RF G ++L ++
Sbjct: 156 VISPLSEMIGRRIVYLVTLMIYIVLQIPCALAPNIACLLIVRFFCGCFGCTPLTLAGGVI 215
Query: 726 TDASTEKTRARGMALVGLAFS--VAFIVGPLCGAW 824
+D +TR RG+A+ A +GPL G W
Sbjct: 216 SDVW--ETRERGLAIAFFAAGPYAGPTLGPLVGGW 248
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 32.3 bits (70), Expect = 0.14
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = +3
Query: 546 PIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIV 725
P+ G LSD +GR+P ++ ++ + +AR + G+ + +I+
Sbjct: 84 PLYGRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSII 143
Query: 726 -TDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKTSDITNGPWGERPAL-YALXLSI 899
+D + + R + + + + +G G A+ WG R A + + + I
Sbjct: 144 SSDIVSLRERGTWQGITNIVWGIGGSLGGPLGGLIAQR-------WGWRTAFHFQVPMGI 196
Query: 900 ANIALVAF 923
+ LVA+
Sbjct: 197 LSTILVAW 204
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 31.9 bits (69), Expect = 0.19
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +3
Query: 543 SPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKAN-VSLCMA 719
S + LS+ YGR P+ + L ++ V+ RF G +S C
Sbjct: 161 SVLFAPLSEVYGRLPLYSVTLVIFVVFQIGGGCSKNIWSLVIFRFFHGFFGCTPMSACGG 220
Query: 720 IVTDASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKT 836
++D R + + A V +VGP+ G + ++
Sbjct: 221 TISDLFNPIQRTGALLVFCAAAFVGPLVGPVMGGYITES 259
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 513 SMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLS 692
S SF +++ G L+D GRK +LL + + + + VV RFI G
Sbjct: 127 SATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYG 186
Query: 693 KANVSLCMAI-VTDASTEKTRAR 758
SL + + +T+ + + R R
Sbjct: 187 IGLTSLIVPMYITELAPARLRGR 209
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 29.5 bits (63), Expect = 0.99
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 420 YSTLLQAVRSFQKLTGAPDRFVSVLFGGALGSMYSFLQFLT-SPIVGSLSDAYGRKPMLL 596
Y ++ VR F K P+ + + + S Y FLQF+T SP+ G+++ + G +L
Sbjct: 359 YGLMMNLVRDFSKNLENPNFYYEREY---VDSFYDFLQFMTSSPLGGNMACSAGLTSLLG 415
Query: 597 ICLTGIAASHALWSLAETFLIFVVARFIGGLSKA 698
L+ + A + +A + I ++ I G S A
Sbjct: 416 YHLS-VKTPQATYVVARS--IVMLDHLIDGYSMA 446
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 29.5 bits (63), Expect = 0.99
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = -2
Query: 856 GPLVISLVLANHAPHSGPTMNATENAKPTRAIPLALVFSVEASVTMAMHRLTLALLNPPM 677
GPL ++ A + P+M++ A+ +P++ S+E T++ +L +A LN +
Sbjct: 449 GPLTATICHAFNL-EKAPSMHSLAEAQMIPDVPISHSNSMEPLDTVSSLKLEIAKLNAAL 507
Query: 676 NRATTNIRNVSAKLHSA 626
+ N+ K+ +A
Sbjct: 508 KEKNLELENLKRKIMNA 524
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 676 NRATTNIRNVSAKLHSACDAAIPVRHISSIGFLPYASERLPT 551
N + ++ K S D ++P+R +S++ PY SE LP+
Sbjct: 121 NGSKNGAKSAVKKEESDTDDSVPLRAVSTVSLTPYKSE-LPS 161
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 5.3
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 552 VGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMA-IVT 728
+G LSD GRKP+ + + +L + +++ FI G++ + +A +
Sbjct: 137 LGPLSDIGGRKPVYFCSIFVYTVFNISCALPRNIVQMIISHFIIGVAGSTALTNVAGGIP 196
Query: 729 DASTEKTRARGMALVGLAFSVAFIVGPLCGAWFAKTSDITNGPWGERPALYALXLSIANI 908
D E T A V ++ V G GA A DI N +G R Y +
Sbjct: 197 DLFPEDT-----AGVPMSLFVWACAGGAIGAPMATGVDI-NAKYGWRWLYYINIIVGGFF 250
Query: 909 ALVAFGLPET 938
+V +PET
Sbjct: 251 LIVILIIPET 260
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 26.6 bits (56), Expect = 7.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -2
Query: 814 HSGPTMNATENAKPTRAIPLALVFSVEASVTMAMHRLTLALLNPPMNRATTNIRN--VSA 641
H PT N + I ++ + +T+ + R + PP N + TNI N V+A
Sbjct: 1126 HKRPTANLVSKRILSPLIGQIVLICIIQYITLRIVRREPWYIPPPANSSDTNITNSDVTA 1185
Query: 640 KLHSACDAAIPVRHISSIG 584
+C I + + SIG
Sbjct: 1186 LFLISCFQYIFIGVVLSIG 1204
>SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 639
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 70 GETGESLFEFFSSVSRMYTSK 132
G+TG++LF FSS+S +T +
Sbjct: 490 GQTGDNLFRGFSSLSTRFTDR 510
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 135 IFRCI-HTRH*RKKFKQTFTSFTLTYDI 55
+F+ + H R R K QTFT F YD+
Sbjct: 508 VFQLVDHIRKQRMKMVQTFTQFKYVYDL 535
>SPAC2F7.05c |||translation initiation factor eIF5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 390 SREENQENSLYSTLLQAVRSFQKLTGAPDRFVSVLFGGALGSMYSFLQFLTSPIVGSLSD 569
S+ E + N + T++ + K G P +V+ FG LG+ + + + IV D
Sbjct: 24 SKIEGKGNGI-KTVIPNMSDIAKALGRPPLYVTKFFGFELGAQTTIIADMDRYIVNGAHD 82
Query: 570 A 572
A
Sbjct: 83 A 83
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 913 WWLLVYPKPXQGXRXPYRYII*TVDSVLHGIT*LTAVKIISLSKKVY 1053
W + YP+P P RY+ D L I L + I SKK +
Sbjct: 483 WDQVEYPQPYVASEWPIRYVSIKDDGSLIAIAGLHGLAIYVCSKKTW 529
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 420 YSTLLQAVRSFQKLTGAPDRFVSVLFGGALGSMYSFLQFLTSPIVGSLS 566
+ LLQA +F+K+ + + G G+ F F TS G+LS
Sbjct: 1112 FPELLQAESTFKKIQSVSGYNIDAMVAGVDGAYDEFCDFQTSLKDGALS 1160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,748,583
Number of Sequences: 5004
Number of extensions: 98449
Number of successful extensions: 273
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 663396606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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