Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_I20
         (1254 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0794 - 5955763-5957238                                           33   0.36 
02_01_0796 - 5966143-5967636                                           32   1.1  
02_02_0005 - 6016429-6017955                                           31   2.5  
02_02_0001 - 5977498-5979003                                           31   2.5  
03_03_0097 + 14386262-14386532,14387696-14387919,14388057-143883...    29   5.8  

>02_01_0794 - 5955763-5957238
          Length = 491

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 263 GTVCFYNLCDINIVIHRLQYLIA 195
           G  CFY+LCD+N V+H L   IA
Sbjct: 152 GPSCFYSLCDLNAVVHGLHEQIA 174


>02_01_0796 - 5966143-5967636
          Length = 497

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 263 GTVCFYNLCDINIVIHRL 210
           G  CFY+LCD+N V+H L
Sbjct: 153 GPSCFYSLCDLNAVVHGL 170


>02_02_0005 - 6016429-6017955
          Length = 508

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 263 GTVCFYNLCDINIVIHRLQ 207
           G  CFY+LCD+N   H LQ
Sbjct: 157 GPSCFYSLCDLNAAAHGLQ 175


>02_02_0001 - 5977498-5979003
          Length = 501

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 263 GTVCFYNLCDINIVIHRLQ 207
           G  CFY+LCD+N   H LQ
Sbjct: 160 GPSCFYSLCDLNAAAHGLQ 178


>03_03_0097 +
           14386262-14386532,14387696-14387919,14388057-14388307,
           14388393-14388771,14388958-14389389
          Length = 518

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 577 CLVVSYKYLHSKQVSALITIHKFSFHKHTQIKHVQHYLINFKAKFGKTISL 729
           C+  ++  L +K V A+I + KFSF    +  H    LI  + KFG  I L
Sbjct: 464 CIGQNFAMLEAKLVMAMI-LQKFSFALSPKYVHAPADLITLQPKFGLPILL 513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,070,011
Number of Sequences: 37544
Number of extensions: 496003
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)