Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_I15
         (1257 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo...    64   5e-11
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo...    62   1e-10
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce...    57   6e-09
SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    32   0.14 
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3...    32   0.19 
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|...    28   3.1  
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc...    28   3.1  
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po...    27   7.2  

>SPCC191.09c |gst1||glutathione S-transferase
           Gst1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 229

 Score = 63.7 bits (148), Expect = 5e-11
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
 Frame = +1

Query: 226 EQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKYAKGSSL-YPEDPKARAL 393
           EQ  PE+L LNP   VPTL+D   +  +IWES AI+ YL +KY     +  P D      
Sbjct: 40  EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYK 99

Query: 394 VDQRLYFDI---GTLYQRFSDY-FYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVA 561
           V Q L+F     G ++ +   +  Y Q    +   + +NE ++  L +L+  L+ + Y+ 
Sbjct: 100 VIQYLFFQASGQGIIWGQAGWFSVYHQELVISAITRYRNE-IKRVLGVLEDILKDRDYLV 158

Query: 562 GPNLTVADLSLIASVSSLE 618
               T+ADLS I+  + LE
Sbjct: 159 ANRFTIADLSFISWNNFLE 177


>SPCC965.07c |gst2||glutathione S-transferase
           Gst2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 230

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
 Frame = +1

Query: 223 GEQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKY--AKGSSLYPEDPKAR 387
           GEQ   E+L LNP   VPTLVD   +  +IWES AI+ YL +KY   +  SL  +DP+  
Sbjct: 39  GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYY 98

Query: 388 ALVDQRLYFDI---GTLYQR--FSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQK 552
            L+ Q L+F     G ++ +  + ++F+ +    A   + +NE ++  L +L+  L+ + 
Sbjct: 99  KLI-QYLFFQASGQGVIWGQAGWFNFFHHEPVVSA-VTRYRNE-IKRVLGVLEDILKDRD 155

Query: 553 YVAGPNLTVADLSLI 597
           Y+     T+ADLS I
Sbjct: 156 YLVANKYTIADLSFI 170


>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 242

 Score = 56.8 bits (131), Expect = 6e-09
 Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 17/176 (9%)
 Frame = +1

Query: 238 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 417
           P Y KL+P    P +VDDG++  ES AI+ +LV KY  G S  P +     L    L+  
Sbjct: 40  PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKY--GPSFKPSEEDVAELEKYELWMH 97

Query: 418 IG--------------TLYQRFSDYFYPQV---FAGAPADKAKNEKVQEALQLLDKFLEG 546
                            L    +  F+  +   F      K  +++    L  +D  L  
Sbjct: 98  FSEASLMPFIWASHVLDLSVNMTPIFFRYIVRQFVNGIKSKYLSKETFLNLDYIDNHLAS 157

Query: 547 QKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEK 714
            +Y AG   T AD  +   + + +   +  K Y N+KRW   V S  P  + A EK
Sbjct: 158 NEYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPACRIAAEK 212


>SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 234

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +2

Query: 713 KDWRHSRDLSIACLKSE-HLSTRNENLFKITSLELNLTN*AELKRHCL 853
           K+  H++ +S+ CL S+ +L   ++ +FK  ++ELN  N  ++KR+ L
Sbjct: 58  KNHLHNKHVSLYCLLSDRYLQPPSKRIFKRWNMELNNLNCPDIKRYIL 105


>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 334

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = +1

Query: 490 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK 657
           A+  K+ +AL+   ++ E Q    KY   P L    LS  A+  S+  S        + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175

Query: 658 RWYETVKSTAPGYQEANEKGLEA 726
            WY+ V     G  E +E   EA
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198


>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
           Abc4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1469

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 762 SLFKHAIDKSLECLQSFLVGLLVTRSCTLNRLVPS 658
           S +K++++  L CL  +L+   +TRS T+ + V S
Sbjct: 51  SWYKYSLESGLVCLYLYLIYRWITRSFTVKQTVGS 85


>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 721

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 34/118 (28%), Positives = 52/118 (44%)
 Frame = +1

Query: 289 DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIGTLYQRFSDYFYPQVF 468
           + LSI ESR  I  +  ++   S L+P D K  A  + RL F +G  + R +      + 
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF-LGPNHPRVNRETLDAIK 320

Query: 469 AGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKK 642
           A +P     +E    A  L+         V+GPN     + +  S ++LE  DI  KK
Sbjct: 321 A-SPI--LADEGAFYAKHLILDLSTLSPAVSGPN----SVKVYNSAATLEKKDILIKK 371


>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1076

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 649 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNS 747
           +V + YE+++S    Y+ ANEK  EA   +V+S
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSS 771


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,699,585
Number of Sequences: 5004
Number of extensions: 70297
Number of successful extensions: 214
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 681602054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)