Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_I09
         (1575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ...    35   6.7  

>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
            Chlamydomonadales|Rep: Pherophorin-C2 protein precursor -
            Chlamydomonas reinhardtii
          Length = 853

 Score = 34.7 bits (76), Expect = 6.7
 Identities = 28/116 (24%), Positives = 29/116 (25%)
 Frame = -1

Query: 1158 PTSPRXPXXXSXXTXPXXXPXXTXXPXXXPRVXXXPXXGPHXFXXPHXXXPGXEXFXXXX 979
            P SP  P   S    P   P     P   P     P   P     P    P         
Sbjct: 379  PPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPP 438

Query: 978  PXXXXXLPPRXXXXXPFXPXSXXPPX*XXXGPXQVASETPXXPXKXPXLXXPXFPP 811
            P      PP      P  P S  PP      P      +P  P   P    P  PP
Sbjct: 439  PPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPP 494



 Score = 34.3 bits (75), Expect = 8.9
 Identities = 38/179 (21%), Positives = 40/179 (22%)
 Frame = -1

Query: 1158 PTSPRXPXXXSXXTXPXXXPXXTXXPXXXPRVXXXPXXGPHXFXXPHXXXPGXEXFXXXX 979
            P SP  P        P   P  +  P   P     P   P     P    P         
Sbjct: 199  PPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPP-PPPSPPPPSPPPPSPPP 257

Query: 978  PXXXXXLPPRXXXXXPFXPXSXXPPX*XXXGPXQVASETPXXPXKXPXLXXPXFPPXLXX 799
            P      PP      P  P    PP      P      +P  P   P    P  PP    
Sbjct: 258  PPPPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPP 317

Query: 798  XSHXXXXRDXXXPHXAPXFXXXQXGTXKGPMPXXTLXPXXXPXXLSPXXGXXPXXXIPP 622
             S          P   P            P P     P   P   SP     P    PP
Sbjct: 318  PSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPP 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,359,828
Number of Sequences: 1657284
Number of extensions: 3711457
Number of successful extensions: 6785
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5264
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 169377379500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)