Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_I01
(1319 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 49 1e-06
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 45 2e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 3e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.007
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 36 0.012
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.029
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.20
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.27
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.1
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 3.3
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 49.2 bits (112), Expect = 1e-06
Identities = 34/87 (39%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = -1
Query: 923 GKRGXXGXXXXGGXGXHXPXXGGGGAXXRXGKTXR--GGXGXRGXPXPGXGXGGXXXXGN 750
G G GG G P GG G G GG G G PG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGG-GPGGFEGGPGGFGG 242
Query: 749 GQGGEXGGXXXGGFXGGXXGXXKGPGG 669
G GG GG GGF GG G GPGG
Sbjct: 243 GPGGFGGG--LGGFGGGPGGFGGGPGG 267
Score = 46.8 bits (106), Expect = 7e-06
Identities = 40/102 (39%), Positives = 40/102 (39%)
Frame = -1
Query: 977 GGKXGXXXGXGXPXGXXPGKRGXXGXXXXGGXGXHXPXXGGGGAXXRXGKTXRGGXGXRG 798
GG G G G P PG G G GG G H GG G G G G
Sbjct: 188 GGFGGFGGGSGGPP---PGPGGFGGFGGFGGEGHHHGGHGGFGG---------GPGGFEG 235
Query: 797 XPXPGXGXGGXXXXGNGQGGEXGGXXXGGFXGGXXGXXKGPG 672
P G G GG G G GG GG GGF GG G GPG
Sbjct: 236 GPG-GFG-GGPGGFGGGLGGFGGG--PGGFGGGPGGHG-GPG 272
Score = 44.0 bits (99), Expect = 5e-05
Identities = 28/70 (40%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -1
Query: 818 GGXGXRGXPXPGXGXGGXXXXGNGQGGEXGGXXXGGFXGGXXGXXKGPGGVXPXRXG-GX 642
G G G P PG G G G+G GG GGF GG G GPGG G G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG--HGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Query: 641 VLXXLXGGGG 612
L GG G
Sbjct: 250 GLGGFGGGPG 259
Score = 41.5 bits (93), Expect = 3e-04
Identities = 33/84 (39%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = -1
Query: 917 RGXXGXXXXG-GXGXHXPXXGGGGAXXRXGKTXRGGXGXRGXPXPGXGXGGXXXXGNGQG 741
RG G G G G P G GG G GG G G G GG G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGF---GGEGHHHGGHGGFG-GGPGGFEGGPG 238
Query: 740 GEXGGXXXGGFXGGXXGXXKGPGG 669
G GG GGF GG G GPGG
Sbjct: 239 GFGGGP--GGFGGGLGGFGGGPGG 260
Score = 35.1 bits (77), Expect = 0.022
Identities = 25/74 (33%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -2
Query: 817 GGXEXGAXPXPXG--GXGGXXXRXTGRGGNXEXXXGXGSXGEXPGX-GKGPXGFXPXEXG 647
GG G P P G G GG GG+ G G PG G GP GF G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 646 VXFXEXCXGGGAXG 605
GGG G
Sbjct: 254 FGGGPGGFGGGPGG 267
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 619 PPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXX-PPXSPPCPXPXSXXPPXPXPG 789
PP PP TPP P PP PP PP +PP P P S P P PG
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +1
Query: 616 PPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXS-PPCPXP 756
PP PP PP P PP PP P S P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.5 bits (93), Expect = 3e-04
Identities = 47/201 (23%), Positives = 50/201 (24%), Gaps = 4/201 (1%)
Frame = +1
Query: 538 KXXXPKGRQRAGTXKRAXXRXFXXGPPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPP 717
K P R A + PPPP + PP G + P PP PP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSS---LP--PPPPPP 343
Query: 718 XXXPPXSPPCPXPXSXXPPXPXPGXG---XXXXXXXXXXXXXXRXXAPPPPXXGXCXP-X 885
S P P PP P P APPP G P
Sbjct: 344 RSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL 403
Query: 886 PPXXXXPXXPLXPGXXPXGXPXPXXXPXFPPXGXXPPXXXGXXXPXXXXXGXPXXXXXGG 1065
PP P P P P P PP P G P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLP-PSAPPSLPP-SAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Query: 1066 PXXXXPXXXPXFWXPPPXXXP 1128
P P PPP P
Sbjct: 462 GMPAAPPLPPAAPAPPPAPAP 482
Score = 35.5 bits (78), Expect = 0.016
Identities = 35/139 (25%), Positives = 39/139 (28%), Gaps = 3/139 (2%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCP-XPXSXXPPXPXPG 789
PP P + + PP R + P P PP N PP SPP P P S P
Sbjct: 230 PPIPPSIPSSRPPERV-PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 790 XG--XXXXXXXXXXXXXXRXXAPPPPXXGXCXPXPPXXXXPXXPLXPGXXPXGXPXPXXX 963
PPPP P P P+ G P P
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPP------PPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Query: 964 PXFPPXGXXPPXXXGXXXP 1020
P G P G P
Sbjct: 343 PRSNAAGSIPLPPQGRSAP 361
Score = 32.7 bits (71), Expect = 0.12
Identities = 33/131 (25%), Positives = 34/131 (25%), Gaps = 3/131 (2%)
Frame = +1
Query: 613 PPPPXXLXKTX---PPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPPXPX 783
PPPP T PP P P PP P P P + PP P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNP---PAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 784 PGXGXXXXXXXXXXXXXXRXXAPPPPXXGXCXPXPPXXXXPXXPLXPGXXPXGXPXPXXX 963
P APP G P P P P P P P
Sbjct: 420 P------PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 964 PXFPPXGXXPP 996
P PP P
Sbjct: 474 PAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.36
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 669 PXGPFPXPGXSPXEPX-PXXXSXFPPLPVXRXXXPPXPPSGXGXAPXSXP 815
P P P +P P P PPLP PP PP+ P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 3e-04
Identities = 31/117 (26%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPP------XSPPCPXPXSXXPP 774
PP P P PP P PP P PP +PP P P S PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 775 XPXPGXGXXXXXXXXXXXXXXR--XXAPPPPXXGXCXPXP-PXXXXPXXPLXPGXXP 936
P P G + PP P P P P P P+ P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 39.9 bits (89), Expect = 8e-04
Identities = 33/131 (25%), Positives = 35/131 (26%), Gaps = 4/131 (3%)
Frame = +1
Query: 616 PPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXN---PPXXXPPXSPPCPXPXSXXPPXPXP 786
P P P P P P P + PP P +PP P P PP P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 787 GXGXXXXXXXXXXXXXXRXXAPPPPXXGXCXPXP-PXXXXPXXPLXPGXXPXGXPXPXXX 963
G PP P P P P P P P P
Sbjct: 1175 SSG-------IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 964 PXFPPXGXXPP 996
P P PP
Sbjct: 1228 PVPVPTAKAPP 1238
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/130 (24%), Positives = 32/130 (24%), Gaps = 2/130 (1%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPPXPXP-G 789
PP P P PP P P P PP P P S P P P G
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 790 XGXXXXXXXXXXXXXXRXXAPPPPXXGXCXPXPPXXXXPXXPLXPGXXPXGXPXPXXXPX 969
APP P P P P P P P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 970 FP-PXGXXPP 996
P P PP
Sbjct: 1142 VPKPSVAAPP 1151
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 606 PWAPPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXP-P 782
P APPP + P + P P P P P P + PP+P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA--PPVPKPSVAVPPVPAP 1117
Query: 783 SGXGXAP 803
SG P
Sbjct: 1118 SGAPPVP 1124
Score = 34.3 bits (75), Expect = 0.038
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +3
Query: 612 APPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXPPSGX 791
A PP P P P P +P P P + PP+P PP P
Sbjct: 1129 AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA--PPVPAPSSGIPPVPKPAA 1186
Query: 792 GXAPXSXP 815
G P P
Sbjct: 1187 GVPPVPPP 1194
Score = 33.1 bits (72), Expect = 0.088
Identities = 30/130 (23%), Positives = 35/130 (26%)
Frame = +3
Query: 615 PPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXPPSGXG 794
PP + S P P P P +P P P + PP+P P PP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP---TSTPPVPKSSSGAPSAPP--PV 1066
Query: 795 XAPXSXPPXXGFXXXXXXXXXXXXGXVXPXPPPXXPXXXXPFXRXXXXWXPXPGXXPXFS 974
AP S P + P P P P P P P
Sbjct: 1067 PAPSSEIP--SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Query: 975 PPGXXXPXXP 1004
P P P
Sbjct: 1125 KPSVAAPPVP 1134
Score = 32.7 bits (71), Expect = 0.12
Identities = 23/74 (31%), Positives = 27/74 (36%)
Frame = +3
Query: 594 AGXXPWAPPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPP 773
A P PPP + P S G P P P +P P P + PP+PV PP
Sbjct: 1185 AAGVPPVPPPSEAPPVPKP-SVGVPPV---PPPSTAP--PVPTPSAGLPPVPVPTAKAPP 1238
Query: 774 XPPSGXGXAPXSXP 815
P S P
Sbjct: 1239 VPAPSSEAPSVSTP 1252
Score = 30.3 bits (65), Expect = 0.62
Identities = 32/131 (24%), Positives = 35/131 (26%)
Frame = +3
Query: 612 APPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXPPSGX 791
A PP P P P P +P P P + PP+P P PS
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA--PPVPAPSGAPPVPKPS-- 1165
Query: 792 GXAPXSXPPXXGFXXXXXXXXXXXXGXVXPXPPPXXPXXXXPFXRXXXXWXPXPGXXPXF 971
AP P G V P PPP P P P P
Sbjct: 1166 VAAPPVPAPSSGI-----PPVPKPAAGVPPVPPP-SEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 972 SPPGXXXPXXP 1004
P P P
Sbjct: 1220 PTPSAGLPPVP 1230
Score = 30.3 bits (65), Expect = 0.62
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +3
Query: 612 APPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXPPSGX 791
APP S P P P P +P P P PP+P PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAP--PVPKPSVGVPPVP-PPSTAPPVPTPSA 1224
Query: 792 GXAPXSXP 815
G P P
Sbjct: 1225 GLPPVPVP 1232
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +3
Query: 618 PPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXP-PSGXG 794
P + ++ P + P P + P P S PP+P+ PP P PS
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 795 XA--PXSXPP 818
P S PP
Sbjct: 1042 PVPIPTSTPP 1051
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.007
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = -1
Query: 926 PGKRGXXGXXXXGGXGXHXPXXG-GGGAXXRXGKTXRGGXGXRGXPXPGXGXGGXXXXGN 750
PG RG G G G + G GGG G G G RG G GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG--GRGGARGGRGGSSG 62
Query: 749 GQGGEXGG 726
G+GG GG
Sbjct: 63 GRGGAKGG 70
Score = 36.3 bits (80), Expect = 0.009
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 821 RGGXGXRGXPXPGXGXGGXXXXGNGQGGEXGG-XXXGGFXGGXXGXXKGPGG 669
RGG G G G G G G+GG GG GG GG G G GG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 33.5 bits (73), Expect = 0.067
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = -1
Query: 875 HXPXXGGGGAXXRXGKTX-RGGXGXRGXPXPGXGXGGXXXXGNGQGGEXGGXXXGGFXGG 699
+ P GG R G+ GG G G G GG G+GG G G G
Sbjct: 3 YTPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Query: 698 XXGXXKGPGGV--XPXRXGG 645
G KG V P R G
Sbjct: 63 GRGGAKGGAKVIIEPHRHAG 82
Score = 32.7 bits (71), Expect = 0.12
Identities = 24/66 (36%), Positives = 25/66 (37%)
Frame = -1
Query: 935 GXXPGKRGXXGXXXXGGXGXHXPXXGGGGAXXRXGKTXRGGXGXRGXPXPGXGXGGXXXX 756
G G RG G GG G GG R G RGG G RG G G G
Sbjct: 9 GGRGGSRGGRGGFN-GGRGGFGGGRGGARGGGRGGA--RGGRGGRGGARGGRG-GSSGGR 64
Query: 755 GNGQGG 738
G +GG
Sbjct: 65 GGAKGG 70
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = -1
Query: 995 GGXXPXGGKXGXXXGXGXPXGXXPGKRGXXGXXXXGGXGXHXPXXGGGGAXXRXGKTXRG 816
G GG G G G G RG G G G G GGA G + G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRG--GARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 815 GXGXRG 798
G +G
Sbjct: 64 RGGAKG 69
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXP 756
PPPP + T P PP P PP PP PP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.5 bits (73), Expect = 0.067
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 678 PFPXPGXSPXEPXPXXXSXFPPLPVXRXXXPPXPPSGXGXAPXSXPP 818
P P P P P PP P+ PP PP G A PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 646 PPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPPXPXP 786
PP P P P PP P PP PP P PP P P
Sbjct: 735 PPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.5 bits (68), Expect = 0.27
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +1
Query: 847 APPPPXXGXCXPXPPXXXXPXXPLXP--GXXPXGXPXPXXXPXFPPXGXXPP 996
+PPPP P P P P P G P P P PP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 631 LXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPPXPXP 786
L K+ PP P P P P P P PP P + P P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/89 (26%), Positives = 25/89 (28%)
Frame = +1
Query: 700 PPXNPPXXXPPXSPPCPXPXSXXPPXPXPGXGXXXXXXXXXXXXXXRXXAPPPPXXGXCX 879
PP PP P P P P PP P G PPPP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP--PPAPIMGG-----------------PPPPPPPPGVAG 772
Query: 880 PXPPXXXXPXXPLXPGXXPXGXPXPXXXP 966
PP P + G P P P
Sbjct: 773 AGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 35.9 bits (79), Expect = 0.012
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = -1
Query: 854 GGAXXRXGKTXRGGXGXRGXPXPGXGXGGXXXXGNGQGGEXGGXXXGGFXGGXXGXXKG 678
G + + G G RG G G GN +GG GG GGF GG G +G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGG-FGGGSRGGFGGGSRGGSRG 180
Score = 30.7 bits (66), Expect = 0.47
Identities = 27/78 (34%), Positives = 29/78 (37%)
Frame = -1
Query: 935 GXXPGKRGXXGXXXXGGXGXHXPXXGGGGAXXRXGKTXRGGXGXRGXPXPGXGXGGXXXX 756
G K G GG G G GG+ G RGG G G G G G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFR--GGRGGSRGGFGGNSRGGFG--GGSRGGFGGGS---R 175
Query: 755 GNGQGGEXGGXXXGGFXG 702
G +GG GG GGF G
Sbjct: 176 GGSRGGFRGG-SRGGFRG 192
Score = 30.3 bits (65), Expect = 0.62
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = -1
Query: 1007 PXXXGGXXPXGGKXGXXX--GXGXPXGXXPGKRGXXGXXXXGGXGXHXPXXGGGGAXXRX 834
P G P G + G G G G G RG G GG G GGG+
Sbjct: 119 PKTVGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGS 178
Query: 833 GKTXRGG--XGXRG 798
RGG G RG
Sbjct: 179 RGGFRGGSRGGFRG 192
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.029
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = +1
Query: 700 PPXNPPXXXPPXSPPCPXPXSXXPPXPXPG 789
PP NPP PP PP P S PP P PG
Sbjct: 5 PPGNPP---PPPPPPGFEPPSQPPPPPPPG 31
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.20
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 869 PXXGGGGAXXRXGKTXRGGXGXRGXPXPGXGXG-GXXXXGNGQGG 738
P GGG R G RGG G RG G G G G GN G
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRG 487
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.27
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPP---XSPP-CPXPXSXXPPXP 780
PP + PP PP P P P PP P SPP P S PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +1
Query: 847 APPPPXXGXCXPXPPXXXXPXXPLXPGXXPXGXP-XPXXXPXFPPXGXXPP 996
A PP P P P P P P P P P PP PP
Sbjct: 155 ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Frame = +3
Query: 612 APPPXQXSQNXTPXSXGXNPXGPFPXPGXSPXEP--XPXXXSXFPPLPVXRXXXPPXPPS 785
A PP + TP S P P P P P P S PP+P PP P+
Sbjct: 122 AAPPSAPAP-PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP--SSLPPPAQPA 178
Query: 786 GXGXAPXSXP 815
+P S P
Sbjct: 179 APVKSPPSAP 188
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +1
Query: 613 PPPPXXLXK--TXPPXRXGXTPPGPFXXPXFPPXNPP---XXXPPXSPPCP 750
PP P + T P R PP P P P PP PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPP 774
PP P L P +PP P P PP PP P + P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 700 PPXNPPXXXPPXSPPCPXPXSXXPPXPXP 786
PP PP P PP P S PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/45 (26%), Positives = 15/45 (33%)
Frame = +1
Query: 616 PPPXXLXKTXPPXRXGXTPPGPFXXPXFPPXNPPXXXPPXSPPCP 750
PPP + PP PP + +PP P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAP 250
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/94 (23%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
Frame = +1
Query: 613 PPPPXXLXKTXPPXRXGXT-PPGPFXXPXFPPXNPPXXXPPXSPPCPXPXSXXPPXPXPG 789
PPPP + G P PP P P P P P PP
Sbjct: 194 PPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP-QSTN 252
Query: 790 XGXXXXXXXXXXXXXXRXXAPPPPXXGXCXPXPP 891
+ PPPP P PP
Sbjct: 253 TSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,590,404
Number of Sequences: 5004
Number of extensions: 34779
Number of successful extensions: 307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 723332792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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