Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H24
         (1240 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.6  
AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.        25   6.0  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        25   6.0  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        25   6.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -3

Query: 356 GLPGPGSRATSPHSPVEPPDASPHGCSLFPG*RPHRLTQLGLGDLQTSLERSREGS 189
           G+P P   A +      PP   P   SL PG  P R T L   D Q S E +  G+
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPPPPSSLSPGGVP-RPTVLQKLDPQLSEEAAAVGA 821


>AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 29  RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 57


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 157 RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 185


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 260 RPHRLTQLGLGDLQTSLERSREGSQPCXL 174
           R HR + + LG  +     +++G QPC L
Sbjct: 157 RTHRRSTVTLGIRKIQFAPTKQGQQPCTL 185


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,261
Number of Sequences: 2352
Number of extensions: 15045
Number of successful extensions: 71
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141426462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)