Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H24
(1240 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB095933-1|BAC23109.1| 730|Homo sapiens KIAA2013 protein protein. 36 0.40
U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein. 35 0.53
AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein. 33 1.6
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein. 33 1.6
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein. 33 1.6
AL110277-1|CAB53712.1| 561|Homo sapiens hypothetical protein pr... 33 1.6
AK000968-1|BAA91448.1| 514|Homo sapiens protein ( Homo sapiens ... 33 1.6
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with... 33 1.6
AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor ma... 33 2.8
AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell sp... 33 2.8
U40572-1|AAC50449.1| 540|Homo sapiens beta2-syntrophin protein. 31 6.5
BC048215-1|AAH48215.1| 540|Homo sapiens syntrophin, beta 2 (dys... 31 6.5
AJ010538-1|CAA09232.1| 1133|Homo sapiens ether-a-go-go-related p... 31 6.5
AF243385-1|AAK15149.1| 267|Homo sapiens beta-2 syntrophin protein. 31 6.5
>AB095933-1|BAC23109.1| 730|Homo sapiens KIAA2013 protein protein.
Length = 730
Score = 35.5 bits (78), Expect = 0.40
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 184 GWDPSRLRSKLVWRSPR-----PSWVRRCGLYPGNRLQP*GDASGGSTGL*GDVARLPGP 348
GW P R R K WR R P W R G PG+ + G G + G +A LP P
Sbjct: 4 GWRPPRRRRKQGWRLLRRLRRGPGWAPRSG--PGSEARAAGPV-GWAAGPAAALAPLPAP 60
Query: 349 GSPI 360
G P+
Sbjct: 61 GGPM 64
>U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.53
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 118 RRSSLFERQKKASSKRNGCRXQGWDPSRLRSKLVWRSPRPSWVRRCGLYPGNR 276
RR S RQ+ ASS+R+ C R R +L R+ + SW +R P R
Sbjct: 114 RRPSTRRRQRPASSRRSRCPAAVTSTRRRRCRLTRRTAKASWPKRARCSPSPR 166
>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 2775 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 2832
>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 2775 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 2832
>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 2775 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 2832
>AL110277-1|CAB53712.1| 561|Homo sapiens hypothetical protein
protein.
Length = 561
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 161 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 218
>AK000968-1|BAA91448.1| 514|Homo sapiens protein ( Homo sapiens
cDNA FLJ10106 fis, clone HEMBA1002569, highly similar to
Homo sapiens protein associated with Myc mRNA. ).
Length = 514
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 298 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 355
>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with Myc
protein.
Length = 4641
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 350 PGPGSRATSPHSPVEPPD-ASPHGCSLFPG*RPH--RLTQLGLGDLQTSLERSREGSQ 186
PGPGSR +SP P + +SP G S PH L Q ++T L+ RE S+
Sbjct: 2775 PGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSK 2832
>AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor
mammalian MafA protein.
Length = 352
Score = 32.7 bits (71), Expect = 2.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 538 CAPVPGYRSTKSVGVGPSAHSAGGLPEPPLGRESSESGVA 419
CAP PG G G + AGG P PP G + G +
Sbjct: 69 CAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTS 108
>AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell
specific transcriptional activator protein.
Length = 352
Score = 32.7 bits (71), Expect = 2.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 538 CAPVPGYRSTKSVGVGPSAHSAGGLPEPPLGRESSESGVA 419
CAP PG G G + AGG P PP G + G +
Sbjct: 69 CAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTS 108
>U40572-1|AAC50449.1| 540|Homo sapiens beta2-syntrophin protein.
Length = 540
Score = 31.5 bits (68), Expect = 6.5
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -3
Query: 353 LPGPGSRATSPHSPVEPPDASPHGCSLFPG*RPHRLTQLGLGDLQTSLERSREGSQP 183
LPG SR P SP PP P R R+ + G L S++ RE P
Sbjct: 83 LPGSPSRGLGPPSPPAPPRGPAGEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMP 139
>BC048215-1|AAH48215.1| 540|Homo sapiens syntrophin, beta 2
(dystrophin-associated protein A1, 59kDa, basic
component 2) protein.
Length = 540
Score = 31.5 bits (68), Expect = 6.5
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -3
Query: 353 LPGPGSRATSPHSPVEPPDASPHGCSLFPG*RPHRLTQLGLGDLQTSLERSREGSQP 183
LPG SR P SP PP P R R+ + G L S++ RE P
Sbjct: 83 LPGSPSRGLGPPSPPAPPRGPAGEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMP 139
>AJ010538-1|CAA09232.1| 1133|Homo sapiens ether-a-go-go-related
protein protein.
Length = 1133
Score = 31.5 bits (68), Expect = 6.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 380 VPEDISYIGLPGPGSRATSPHSPVEP-PDASPHGCSLFP 267
VP S + PGPG +TSP PV P P + S FP
Sbjct: 1048 VPPAYSAVTTPGPGPTSTSPLLPVSPLPTLTLDSLSQFP 1086
>AF243385-1|AAK15149.1| 267|Homo sapiens beta-2 syntrophin protein.
Length = 267
Score = 31.5 bits (68), Expect = 6.5
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -3
Query: 353 LPGPGSRATSPHSPVEPPDASPHGCSLFPG*RPHRLTQLGLGDLQTSLERSREGSQP 183
LPG SR P SP PP P R R+ + G L S++ RE P
Sbjct: 83 LPGSPSRGLGPPSPPAPPRGPAGEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMP 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,138,556
Number of Sequences: 237096
Number of extensions: 2283820
Number of successful extensions: 7762
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7745
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17614793600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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