Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H24
         (1240 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p pro...    56   1e-07
AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,...    56   1e-07
AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,...    56   1e-07
AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,...    56   1e-07
AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,...    56   1e-07
AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,...    56   1e-07
AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,...    56   1e-07
AE014134-1034|AAN10576.1|  296|Drosophila melanogaster CG12393-P...    29   9.9  
AE014134-1033|AAF52331.1|  296|Drosophila melanogaster CG12393-P...    29   9.9  

>AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p
           protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,
           isoform F protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,
           isoform E protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,
           isoform D protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,
           isoform B protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,
           isoform A protein.
          Length = 629

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 23  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 82

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 83  EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 130


>AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,
           isoform C protein.
          Length = 665

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 FLRFNSKEFTFRTAKE-GEFETEWLQXAGLGSLAAPFQAGLEVTEAQLGEAVRPLPXXXX 278
           +L+ NS+      + E GE E EWL  AG   L  PF+ GLEV++  L   +  L     
Sbjct: 59  YLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHA 118

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXKPDIRDVFRDLENSSGSEPRSRSAT 425
                                   KPDIRDVFR+ +   G+  RSRSAT
Sbjct: 119 EAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFD-EQGTVTRSRSAT 166


>AE014134-1034|AAN10576.1|  296|Drosophila melanogaster CG12393-PB,
           isoform B protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -1

Query: 244 PSWASVTSRPAWNGAARDPSPAXCNHSVSNSPSFAVRKVNSFELNLKNHNHF 89
           P+ A   +   +    RDP  A  NHS  N      R+V + E   +NH  F
Sbjct: 223 PTPAPAIANSVFYPDVRDPGAANNNHSTVNGAERQRRQVKALEEFARNHERF 274


>AE014134-1033|AAF52331.1|  296|Drosophila melanogaster CG12393-PA,
           isoform A protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -1

Query: 244 PSWASVTSRPAWNGAARDPSPAXCNHSVSNSPSFAVRKVNSFELNLKNHNHF 89
           P+ A   +   +    RDP  A  NHS  N      R+V + E   +NH  F
Sbjct: 223 PTPAPAIANSVFYPDVRDPGAANNNHSTVNGAERQRRQVKALEEFARNHERF 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,266,859
Number of Sequences: 53049
Number of extensions: 672086
Number of successful extensions: 2513
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2506
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6621259125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)