Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H22
(1251 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 148 2e-35
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 148 2e-35
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 147 3e-35
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 141 2e-33
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 36 0.087
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 4.3
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 4.3
AE014298-1860|AAN09650.1| 132|Drosophila melanogaster CG32641-P... 30 7.6
AE014298-1859|AAN09649.1| 132|Drosophila melanogaster CG32640-P... 30 7.6
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p protein.
Length = 269
Score = 148 bits (358), Expect = 2e-35
Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +2
Query: 704 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 883
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 884 LTSEAAMKKIEDNNTLVFIVHTSANK-HISGXSQKIYDIMLLK 1009
LT+EAAMKKIEDNNTLVF+ H ANK H+ +K+YDI + K
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 236
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 148 bits (358), Expect = 2e-35
Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +2
Query: 704 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 883
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 884 LTSEAAMKKIEDNNTLVFIVHTSANK-HISGXSQKIYDIMLLK 1009
LT+EAAMKKIEDNNTLVF+ H ANK H+ +K+YDI + K
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 244
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 147 bits (356), Expect = 3e-35
Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +2
Query: 704 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 883
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 884 LTSEAAMKKIEDNNTLVFIVHTSANK-HISGXSQKIYDIMLLK 1009
LT+EAAMKKIEDNNTLVF+ H ANK H+ +K+YDI + K
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAK 244
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal protein
L23a protein.
Length = 269
Score = 141 bits (342), Expect = 2e-33
Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Frame = +2
Query: 704 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 883
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 884 LTSEAAMKKIEDNNTLVFIVHTSANK-HISGXSQKIYDIMLLK 1009
LT+EAAMKKIEDNNTLVF+ H ANK H+ +K+YDI + K
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 236
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 820 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGL 936
+P+E+ A ++ HG +QHH +P+ +EED QH GL
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGL 201
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 742 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 650
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 742 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 650
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014298-1860|AAN09650.1| 132|Drosophila melanogaster CG32641-PA
protein.
Length = 132
Score = 29.9 bits (64), Expect = 7.6
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 737 EHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIE 916
+H +IR + ++R P K+PR + R +A+N+ L+ +A +K +
Sbjct: 12 DHNATDEEIRRA--YKRMALIYHPDKNKHPRTTAQFRKINEAFNV----LSDASARRKYD 65
Query: 917 DNNTLVFIVHTSANKHISGXSQ 982
+ L HT+ N H SG Q
Sbjct: 66 ASVMLSRRAHTTNNSHNSGGYQ 87
>AE014298-1859|AAN09649.1| 132|Drosophila melanogaster CG32640-PA
protein.
Length = 132
Score = 29.9 bits (64), Expect = 7.6
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 737 EHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIE 916
+H +IR + ++R P K+PR + R +A+N+ L+ +A +K +
Sbjct: 12 DHNATDEEIRRA--YKRMALIYHPDKNKHPRTTAQFRKINEAFNV----LSDASARRKYD 65
Query: 917 DNNTLVFIVHTSANKHISGXSQ 982
+ L HT+ N H SG Q
Sbjct: 66 ASVMLSRRAHTTNNSHNSGGYQ 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,144,395
Number of Sequences: 53049
Number of extensions: 458211
Number of successful extensions: 1490
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6702751545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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