Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H21
         (1352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 4/108 (3%)
 Frame = +1

Query: 733  PPGXP----PPXPPXSXPGXXRXPXPXFPXGEGGXXXXPPXXGXPXSXXXXXXXXXXXXX 900
            PPG P    P  PP + PG      P  P  +G     PP  G P               
Sbjct: 221  PPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG--MQRPPMMGQPPPIRPPNPMGGPRPQ 278

Query: 901  XXXXXPRXGGPFPGXFXXWXPPPGKXXXFPPXGXXPXGXPGFPXPGXF 1044
                     G  P        PP      P  G  P G P    P  +
Sbjct: 279  ISPQNSNLSGGMPSGMVGPPRPP-----MPMQGGAPGGPPQGMRPNFY 321


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 776 PGXEXGGXGGGXPGG 732
           PG   GG GGG PGG
Sbjct: 200 PGAGGGGSGGGAPGG 214



 Score = 25.0 bits (52), Expect = 5.0
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 480 PGPXXSGGGXGXPPPXGGXXGXPQXXG 560
           PG    G G G P   GG  G P   G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGG 226


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
 Frame = -1

Query: 1085 GP-PPPKXFXXPPPKXXPGXGKPGXPXGXXP 996
            GP PPP     PPP   P  G P    G  P
Sbjct: 107  GPLPPPMMGMRPPPMMVPTMGMPPMGLGMRP 137


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 727 GXPPGXPPPXPPXSXPGXXRXP 792
           G PP  PPP P    PG    P
Sbjct: 781 GSPPPPPPPPPSSLSPGGVPRP 802


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 1094 PXXGPPPPKXFXXPPPKXXPGXGKPGXPXGXXPXGGKXXXXP 969
            P   P  P     P P   P  G P  P    P GG     P
Sbjct: 570  PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
 Frame = -2

Query: 697 PPXKWGXXFXXVXXG--GGPXGKXPPXXPFXGFG 602
           PP   G     +  G  GGP G  PP     GFG
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFG 620



 Score = 24.2 bits (50), Expect = 8.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 733 PPGXPPPXPPXSXP 774
           PP  PPP PP   P
Sbjct: 581 PPPAPPPPPPMGPP 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 926,000
Number of Sequences: 2352
Number of extensions: 18516
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 155649285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)