Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H21
         (1352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.65 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   6.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +1

Query: 646 APPPXXXXKNXPPIXXGXXPXGXXKXXGXPPGXPPPXPPXSXP 774
           AP P       P       P    +  G PPG PP  PP   P
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPNPSQ--GPPPGGPPGAPPSQNP 60


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -1

Query: 1094 PXXGPPPPKXFXXPPPKXXPGXGKP 1020
            P   PP P+      PK  PG  +P
Sbjct: 51   PQPRPPHPRLRREAEPKAEPGNNRP 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,385
Number of Sequences: 438
Number of extensions: 10701
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 46824570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)