Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H19
         (1264 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    26   0.60 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   2.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   3.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   7.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   7.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   9.8  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   9.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   9.8  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   9.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   9.8  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 504 VADDPETLRIKANTKIISNVAYHGDLEK 587
           VA + +TL++  + KII N+AY G + +
Sbjct: 345 VAQNEKTLQMIISVKIIQNLAYSGRMNR 372


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 474 FERSKGKFTQVADDPETLRIKANTKIISN 560
           FE        +  DPETL+  +  KIIS+
Sbjct: 339 FEYGGNNIEIIVKDPETLQFPSGMKIISS 367


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 658 LSGGGTSTISPFSLICLCLSIWAFFSRSPWYATLLMIFVFALI 530
           L GGG   +    L  +CL+ W+F       +T+L+ F+  +I
Sbjct: 375 LKGGGGYLLGIQCLTVVCLAFWSFI-----VSTILLWFINKII 412


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 174 YLSAIGLKPFKMNKTCARCEKTVYPTE 254
           Y + +GL     N     CEKT+ P E
Sbjct: 452 YQTKVGLITILRNHKVEVCEKTIIPYE 478


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 396 SSVSLSVR--ELHNKAASRSPCTFSCSRSYCTLGI 298
           + ++L VR  ++HN    ++   F  S  YC + I
Sbjct: 150 AKLALGVRLPDIHNSVTGKTTACFEPSLDYCVVKI 184


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
            acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
 Frame = +2

Query: 887  HPARSERFHHTQXV-PXHAQNAPXXSQTYPXTAXXFHYXPSXXHNP 1021
            H   +   HH+    P H  + P    +YP      H      H P
Sbjct: 425  HIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPHPP 470


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 460 FTLLCSFVFSAIRFSSGVSAIVVGFAFG 377
           +TL   FV      + G S +  GFA G
Sbjct: 85  YTLFKGFVHLGAGLAVGFSGLAAGFAIG 112


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 910 PSHPKXTXTRSKCTPXQPNLPQXS 981
           P H   T T +  TP  P++P  S
Sbjct: 38  PEHLAGTSTTAAATPTPPSVPVGS 61


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 273 KVWHKGCFKCQECSMTLNMRTYKGYGKLPYCEA 371
           K+ ++ C K Q+CS+    R    Y +L  C A
Sbjct: 49  KIQYRPCTKNQQCSILRINRNRCQYCRLKKCIA 81


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 273 KVWHKGCFKCQECSMTLNMRTYKGYGKLPYCEA 371
           K+ ++ C K Q+CS+    R    Y +L  C A
Sbjct: 98  KIQYRPCTKNQQCSILRINRNRCQYCRLKKCIA 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,087
Number of Sequences: 438
Number of extensions: 5128
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43222680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)