Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H14
         (1301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870     33   0.65 
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116...    33   0.65 
03_06_0333 - 33204345-33204803                                         30   4.6  
01_06_0166 + 27145250-27145778,27146062-27146516                       29   6.1  
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    29   8.0  

>02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870
          Length = 279

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 286 GEFSGVWRGVGGQSADVRDDAGRARHAGGVPWAPGRPR 173
           G   GV    GG++  V   A R   AGGV W P R R
Sbjct: 67  GSIGGVALERGGEAGGVEAGAARGDAAGGVAWRPARQR 104


>01_06_0188 -
           27310814-27311138,27311197-27311547,27311682-27311693,
           27313598-27313662,27314945-27314968
          Length = 258

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 310 HHRDRYTG-GEFSGVWRGVGGQSADVR-DDAGRARHAGGVP 194
           H RD Y G  ++SG     GG S   R DD GR RH G  P
Sbjct: 188 HDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGRRRHGGSPP 228


>03_06_0333 - 33204345-33204803
          Length = 152

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 246 DCPPTPRQTPENSPPVYLS 302
           DCPP PR TP ++P   LS
Sbjct: 7   DCPPAPRPTPASTPSTGLS 25


>01_06_0166 + 27145250-27145778,27146062-27146516
          Length = 327

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 256 GGQSADVRDDAGRARHAGGVPWAPGRPR 173
           GG++  V   A R   AGGV W P R R
Sbjct: 125 GGEARGVEAGAARGDAAGGVAWRPARRR 152


>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 286 GEFSGVWRGVGGQSADVRDDAGRARHAGGVPWAP 185
           GE SG   G  G  +  R + G  +H GG  W P
Sbjct: 94  GESSGEAPGAPGHGSSQRAERGPQQHGGGRGWVP 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,272,164
Number of Sequences: 37544
Number of extensions: 536313
Number of successful extensions: 5997
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3545
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)