Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H14
         (1301 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83116-10|CAB05564.2|  311|Caenorhabditis elegans Hypothetical p...    29   9.5  
U23519-9|ABS19470.1|  203|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>Z83116-10|CAB05564.2|  311|Caenorhabditis elegans Hypothetical
           protein M01B2.9 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 488 IFYYVQKIVLLCNIL**FSCY-DLFHFTNEFIFLL 589
           + +Y + +  +CNIL  F C+ DL  FTN   F++
Sbjct: 29  VTFYCKNLRSICNILIGFCCFCDLLLFTNIIAFMI 63


>U23519-9|ABS19470.1|  203|Caenorhabditis elegans Hypothetical
           protein F26G1.11 protein.
          Length = 203

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 705 IKNECYFSNILKLDINYFSCSF 770
           I+N+CYF++I  L ++ F+C F
Sbjct: 182 IQNKCYFTHIFLLLVSLFNCIF 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,909,976
Number of Sequences: 27780
Number of extensions: 424227
Number of successful extensions: 2605
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3631930622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)