Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H10
(1344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 231 1e-60
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 231 1e-60
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 153 4e-37
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 151 8e-37
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 151 8e-37
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 99 6e-21
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 84 2e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 72 8e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 64 2e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 64 2e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 1e-04
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 45 1e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 4e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 0.001
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 41 0.002
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 41 0.002
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 40 0.003
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.009
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 37 0.028
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 36 0.086
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.46
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.61
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.61
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 32 0.80
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 5.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 231 bits (564), Expect = 1e-60
Identities = 109/122 (89%), Positives = 113/122 (92%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 252 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 431
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 432 LR 437
LR
Sbjct: 121 LR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 231 bits (564), Expect = 1e-60
Identities = 109/122 (89%), Positives = 113/122 (92%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 252 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 431
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 432 LR 437
LR
Sbjct: 121 LR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 153 bits (370), Expect = 4e-37
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 252 IQKESTLHLVLRLRGGTI 305
IQKESTLHLVLRLRGG I
Sbjct: 821 IQKESTLHLVLRLRGGDI 838
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 149 bits (361), Expect = 4e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTL GKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 149 bits (361), Expect = 4e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTL GKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAG 212
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 151 bits (367), Expect = 8e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 151 bits (367), Expect = 8e-37
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 252 IQKESTLHLVLRLRGGTI 305
IQK+STLHLVLRLRGG I
Sbjct: 821 IQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 99.1 bits (236), Expect = 6e-21
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
M I VKTLTGK I L++E +D +E +K K+++KEG PP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 252 IQKESTLHLVLRLRGG 299
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYN 251
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 252 IQKESTLHLVLRLR 293
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 93 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 272
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 273 HL 278
L
Sbjct: 152 RL 153
Score = 37.1 bits (82), Expect = 0.028
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 57 IRSNTMXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 176
+ S TM + VKT TGKTIT+E +NVK +++DK+G
Sbjct: 54 VDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQG 88
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 72.1 bits (169), Expect = 8e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXP 182
M IFVKTLTGKTITLEVEASDTIENVKAKIQDKEG P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 64.1 bits (149), Expect = 2e-10
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +3
Query: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQ 257
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 258 KESTLHLVLRLRGG 299
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 64.1 bits (149), Expect = 2e-10
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +3
Query: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQ 257
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 258 KESTLHLVLRLRGG 299
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 54.0 bits (124), Expect = 2e-07
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +3
Query: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQ 257
IFVK L G + ++ DT+ ++K I+ + P L F+GK+LED ++ DYNIQ
Sbjct: 156 IFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQ 214
Query: 258 KESTLHLVLR 287
K ST+ + R
Sbjct: 215 KSSTITMYFR 224
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +3
Query: 81 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQK 260
FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 46 FVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISN 100
Query: 261 ESTLHLVLRL 290
ST+ L R+
Sbjct: 101 NSTMDLHFRI 110
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.8 bits (101), Expect = 1e-04
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLE---DGRTLSDY 248
I+V+ G+T TL+ ASDT+ +VKAKI +K P+ Q+L+ L+ D TL D
Sbjct: 105 IYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDN 163
Query: 249 NIQKESTLHL 278
+ + STL L
Sbjct: 164 SFENGSTLRL 173
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 72 MXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 176
M + +KT TGK IT+E S VK +++DK+G
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQG 30
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +3
Query: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGK 215
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.9 bits (94), Expect = 0.001
Identities = 25/61 (40%), Positives = 30/61 (49%)
Frame = +3
Query: 96 TGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 275
+G L V SDTI VK I R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 276 L 278
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 93 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 272
+ G + ++ + + +K +IQD+ G P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 273 HLVLRLRGG 299
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 93 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 272
+ G + ++ + + +K +IQD+ G P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 273 HLVLRLRGG 299
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = +3
Query: 24 FFRFPSPXTFFIRSNTMXIFV--KTLTGKTITLEVEASDTIENVKAKIQDKEG--XPPDQ 191
FF+ FI + M + V +TLT LE+ TI VKA + ++G P+
Sbjct: 34 FFKMVFLFCSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPEL 93
Query: 192 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT-IEPS 314
Q+LI+ GK L+D + + + ++L R T + PS
Sbjct: 94 QKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRKVTEVAPS 135
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 114 LEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 293
L V SDTI ++K +I R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 37.1 bits (82), Expect = 0.028
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 114 LEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 272
L V SDTI +K +I G R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 35.5 bits (78), Expect = 0.086
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 DSYREFFRFPSPXTFFIRSNTMXIFVK---TLTGKTITLEVEASDTIENVKAKIQDKEGX 179
++ REFF+ + T IR +K L G I +E+++ DTI V + G
Sbjct: 158 EAQREFFKKVTEDTQAIRRKIGSKNIKFNVILHGSRIPMELDSLDTIYTVGMALLKHGGL 217
Query: 180 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 272
+QRL+ K+L+ +TL + I+ S +
Sbjct: 218 ALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = +3
Query: 90 TLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 269
++ G+ ++ +++E +K KI+ + G P + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 270 LHLVLR 287
+ L++R
Sbjct: 207 VELLVR 212
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.61
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 69 TMXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDY 248
T+ + +KTL + T+ + DTI+++ + + QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 249 NIQKESTLHLVLR 287
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.61
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 69 TMXIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDY 248
T+ + +KTL + T+ + DTI+++ + + QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 249 NIQKESTLHLVLR 287
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 32.3 bits (70), Expect = 0.80
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = +3
Query: 87 KTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKES 266
KT + +TL + + IE++ ++ P D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 267 TLHLV 281
+ L+
Sbjct: 73 QIMLL 77
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 357 CRKCYARLHPRATNCRKTKCGHT 425
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 114 LEVEASDTIENVKAKIQDK-EGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 290
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 291 RGGTI 305
+ T+
Sbjct: 160 KLSTL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,377,511
Number of Sequences: 27780
Number of extensions: 367051
Number of successful extensions: 898
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3777624114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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