Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H07
         (1348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.18 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.41 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.71 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   2.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.18
 Identities = 33/150 (22%), Positives = 35/150 (23%), Gaps = 5/150 (3%)
 Frame = +3

Query: 813  PPPXGXXGXXXXXPPPXPPPXXXXXPXXXXXGXXXXPPXXGXXXXP--PXXGGXPXKXXX 986
            PPP           P  P P     P          PP  G    P  P  GG   +   
Sbjct: 164  PPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223

Query: 987  XXXPXXXXXXXGXXXG---GXXXXPPPXXXXKXXPXXXGGXPXGXXXXXXPPXXPXXPXX 1157
               P       G   G   G    PP     +  P      P         P     P  
Sbjct: 224  VPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQN 283

Query: 1158 PPXXXXXPXXPXXGGPPXPXXXXXGGXPXG 1247
                   P      GPP P     GG P G
Sbjct: 284  SNLSGGMPSGMV--GPPRPPMPMQGGAPGG 311


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.41
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = +2

Query: 740 PPXGFXFFXPXXGGGGGXXPXXKXPPPPRGXGXXXXXPPPXXPPP 874
           PP G  +      GG    P    PPPP G G     PP   PPP
Sbjct: 512 PPHGAGYDGRDLTGG----PLGPPPPPPPG-GAVLNIPPQFLPPP 551



 Score = 27.5 bits (58), Expect = 0.94
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +3

Query: 1128 PPXXPXXPXXPPXXXXXPXXPXXGGPPXPXXXXXGGXPXGGXXPXP 1265
            P   P  P   P     P  P  G PP P      G P G   P P
Sbjct: 570  PAGFPNLPNAQPPPAPPPPPPM-GPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 853 PPPXPPPXXXXXPXXXGGGXXXXPPXGGXXGXPP 954
           P P PPP     P    GG     P GG  G  P
Sbjct: 583 PAPPPPPPMGPPPSPLAGG-----PLGGPAGSRP 611


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.71
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 873 GGGXXGGGXKXXXPXPRGGGG 811
           GG   GGG     P P GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGG 229


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 2.4
 Identities = 8/21 (38%), Positives = 8/21 (38%)
 Frame = +1

Query: 811 PPPPXGXXGXXFXXPPPXPPP 873
           P P           PPP PPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 21.4 bits (43), Expect(2) = 6.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 852 PPPXPPPXXXXXP 890
           PPP PPP     P
Sbjct: 784 PPPPPPPPSSLSP 796



 Score = 21.4 bits (43), Expect(2) = 2.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +1

Query: 853 PPPXPPPXXXXXP 891
           PPP PPP     P
Sbjct: 784 PPPPPPPPSSLSP 796



 Score = 21.0 bits (42), Expect(2) = 6.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 834 GXXXXXPPPXPPP 872
           G     PPP PPP
Sbjct: 779 GIGSPPPPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,041,110
Number of Sequences: 2352
Number of extensions: 22453
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154836495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)