Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H06
         (1322 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis tha...    25   0.80 

>UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis
            thaliana|Rep: F23H11.22 protein - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 929

 Score = 25.4 bits (53), Expect(3) = 0.80
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 1034 PXXXGXLXXXXPPPPPPP 981
            P   G      PPPPPPP
Sbjct: 373  PAPPGPANQTSPPPPPPP 390



 Score = 25.0 bits (52), Expect(3) = 0.80
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 1001 PPPPPPPXXK 972
            PPPPPPP  K
Sbjct: 408  PPPPPPPGKK 417



 Score = 24.2 bits (50), Expect(3) = 0.80
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 998 PPPPPPXXKK 969
           PPPPPP  KK
Sbjct: 421 PPPPPPMSKK 430


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,130,793
Number of Sequences: 1657284
Number of extensions: 10596756
Number of successful extensions: 87192
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 30342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73254
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 136463687783
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)