Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H06
         (1322 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         26   1.2  
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    26   3.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       27   4.0  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    24   5.2  
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856...    24   5.9  
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159...    24   9.0  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 26.2 bits (55), Expect(2) = 1.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 1043 PXXPXXXGXLXXXXPPPPPPP 981
            P  P     L    PPPPPPP
Sbjct: 143  PVKPQPPPSLPPPPPPPPPPP 163



 Score = 24.2 bits (50), Expect(2) = 1.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 1001 PPPPPPPXXKKXK 963
            PPPPPPP     K
Sbjct: 159  PPPPPPPRPPSVK 171


>07_03_1691 - 28726307-28726323,28726588-28726953,28727483-28727567,
            28728255-28728387,28729793-28730328
          Length = 378

 Score = 25.8 bits (54), Expect(2) = 3.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 1001 PPPPPPPXXKKXKXXXXF 948
            PPPPPPP  ++ +    F
Sbjct: 45   PPPPPPPHHRRARSEVAF 62



 Score = 23.0 bits (47), Expect(2) = 3.3
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 1043 PXXPXXXGXLXXXXPPPPPPP 981
            P  P   G      P PPPPP
Sbjct: 28   PPIPSCGGGGGGAGPTPPPPP 48


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 27.1 bits (57), Expect(2) = 4.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 1001 PPPPPPPXXKK 969
            PPPPPPP  KK
Sbjct: 364  PPPPPPPGGKK 374



 Score = 21.4 bits (43), Expect(2) = 4.0
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -1

Query: 1043 PXXPXXXGXLXXXXPPPPPP 984
            P  P          PPPPPP
Sbjct: 313  PPPPPPPKPAAAAPPPPPPP 332


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 24.2 bits (50), Expect(2) = 5.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 998 PPPPPPXXKK 969
           PPPPPP  KK
Sbjct: 373 PPPPPPPIKK 382



 Score = 23.8 bits (49), Expect(2) = 5.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 1001 PPPPPPP 981
            PPPPPPP
Sbjct: 365  PPPPPPP 371


>03_03_0038 +
           13984525-13984917,13985351-13985429,13985535-13985628,
           13985712-13985844
          Length = 232

 Score = 24.2 bits (50), Expect(2) = 5.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 998 PPPPPPXXKKXK 963
           PPPPPP  K+ K
Sbjct: 80  PPPPPPPPKQEK 91



 Score = 23.8 bits (49), Expect(2) = 5.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 1001 PPPPPPP 981
            PPPPPPP
Sbjct: 38   PPPPPPP 44


>12_02_0478 + 19514509-19514940,19515749-19515820,19515954-19515986,
            19516169-19516830,19516905-19517045,19518634-19518830,
            19518878-19518965,19518987-19519041,19519501-19519571,
            19519709-19519763,19519881-19519896,19520286-19520361,
            19521202-19521240,19521312-19521333
          Length = 652

 Score = 24.2 bits (50), Expect(2) = 9.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 1001 PPPPPPPXXKKXK 963
            PPPPPPP  ++ +
Sbjct: 82   PPPPPPPQQQQQR 94



 Score = 23.0 bits (47), Expect(2) = 9.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 1022 GXLXXXXPPPPPP 984
            G L    PPPPPP
Sbjct: 76   GNLSAPPPPPPPP 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,786,713
Number of Sequences: 37544
Number of extensions: 373651
Number of successful extensions: 12287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10739
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)