Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H06
         (1322 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    25   2.6  

>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
            protein.
          Length = 440

 Score = 25.0 bits (52), Expect(2) = 2.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 1043 PXXPXXXGXLXXXXPPPPPPP 981
            P  P     +    PPPPPPP
Sbjct: 193  PPPPPPTKKVVYTPPPPPPPP 213



 Score = 25.0 bits (52), Expect(2) = 2.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 1001 PPPPPPPXXK 972
            PPPPPPP  K
Sbjct: 206  PPPPPPPPKK 215



 Score = 25.0 bits (52), Expect(2) = 2.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 1043 PXXPXXXGXLXXXXPPPPPPP 981
            P  P     +    PPPPPPP
Sbjct: 293  PPPPPPTKKVVYTPPPPPPPP 313



 Score = 25.0 bits (52), Expect(2) = 2.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 1001 PPPPPPPXXK 972
            PPPPPPP  K
Sbjct: 306  PPPPPPPPKK 315



 Score = 24.2 bits (50), Expect(2) = 9.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 998 PPPPPPXXKK 969
           PPPPPP  KK
Sbjct: 402 PPPPPPPTKK 411



 Score = 23.8 bits (49), Expect(2) = 9.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 1001 PPPPPPP 981
            PPPPPPP
Sbjct: 381  PPPPPPP 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,877,272
Number of Sequences: 53049
Number of extensions: 589242
Number of successful extensions: 11301
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9703
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7191706065
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)