Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H05
         (1395 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            34   0.011
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   6.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.9 bits (74), Expect = 0.011
 Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 2/86 (2%)
 Frame = +1

Query: 679 PPPXGGXFXGFXPXAPPPPXKKXKKXXXXXGGGXX--PPGXXXXXXXPPXXPPPGPPPXX 852
           PPP GG      P   PPP    +             P G       P   PPP PPP  
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNL---PNAQPPPAPPPPP 589

Query: 853 XXGXXGXXXXPFXXGGXGGGXXXXPP 930
                G    P   G  GG     PP
Sbjct: 590 ---PMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.2 bits (50), Expect = 9.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 487 PPPPXGRGXFFXGPXXLXPPKN 552
           PPPP G       P  L PP N
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLN 553


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 561 PGXXGGXXGXPPPGGG 608
           PG  GG  G P PGGG
Sbjct: 212 PGGGGGSSGGPGPGGG 227



 Score = 24.6 bits (51), Expect = 6.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 548 KTXXXGXXGGGXGXXXPGGGXXXS 619
           K    G  GGG G   PGGG   S
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSS 219


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 6.9
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -2

Query: 734 GGGGAXGKKPXXXPPXGGGXPXGXXG 657
           GGG A G K     P GGG   G  G
Sbjct: 513 GGGRAEGDKVTFQIPNGGGGGGGGGG 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,616
Number of Sequences: 2352
Number of extensions: 18758
Number of successful extensions: 46
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 161338815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)