Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H04
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 285 5e-77
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 285 5e-77
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 280 2e-75
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 232 5e-61
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 42 0.001
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.046
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.061
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z50756-2|CAA90638.1| 473|Caenorhabditis elegans Hypothetical pr... 29 9.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 9.3
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 9.3
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 285 bits (699), Expect = 5e-77
Identities = 133/225 (59%), Positives = 152/225 (67%)
Frame = +1
Query: 235 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 414
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 415 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 594
+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122
Query: 595 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 774
G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182
Query: 775 YGAALNTAKVEPGSNCAIXXXXXXXXXXXXXXXXXXXNRIXGVDI 909
YGA LNT KVE GS A+ +I G+D+
Sbjct: 183 YGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 227
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 285 bits (699), Expect = 5e-77
Identities = 133/225 (59%), Positives = 152/225 (67%)
Frame = +1
Query: 235 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 414
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 415 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 594
+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122
Query: 595 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 774
G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182
Query: 775 YGAALNTAKVEPGSNCAIXXXXXXXXXXXXXXXXXXXNRIXGVDI 909
YGA LNT KVE GS A+ +I G+D+
Sbjct: 183 YGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 227
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 280 bits (686), Expect = 2e-75
Identities = 133/227 (58%), Positives = 152/227 (66%), Gaps = 2/227 (0%)
Frame = +1
Query: 235 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 408
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 409 EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRST 588
EG+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +
Sbjct: 63 EGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRIS 122
Query: 589 QGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVP 768
QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+
Sbjct: 123 QGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGIS 182
Query: 769 TGYGAALNTAKVEPGSNCAIXXXXXXXXXXXXXXXXXXXNRIXGVDI 909
TGYGA LNT KVE GS A+ +I G+D+
Sbjct: 183 TGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 229
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 232 bits (567), Expect = 5e-61
Identities = 105/186 (56%), Positives = 122/186 (65%)
Frame = +1
Query: 352 ITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCN 531
I T VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274
Query: 532 TCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLC 711
C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLC
Sbjct: 275 ECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLC 334
Query: 712 KVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIXXXXXXXXXXXXXXXXXXXNR 891
KV APL+KV LLGCG+ TGYGA LNT KVE GS A+ +
Sbjct: 335 KVNPQAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKK 394
Query: 892 IXGVDI 909
I G+D+
Sbjct: 395 IVGIDL 400
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 2/178 (1%)
Frame = +1
Query: 286 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLXXXXXXXXXX 462
G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVT 78
Query: 463 XXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKG 639
GD + L C C++C LC + Q G+ G
Sbjct: 79 IGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI---QNYGIDRHG-------- 127
Query: 640 QELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 813
TF +Y + +I KV+ L + CG T Y +L V+PG
Sbjct: 128 ----------TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPG 174
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 42.3 bits (95), Expect = 7e-04
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +1
Query: 292 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLXXXXXXXXXXX 465
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSVVQI 78
Query: 466 XXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRS 585
T + GD V L C C+FC LC +++
Sbjct: 79 GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQN 119
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 41.9 bits (94), Expect = 0.001
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 3/196 (1%)
Frame = +1
Query: 250 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 423
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G P
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65
Query: 424 VVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQG 600
++ + + GD V + L C C++C LC V +
Sbjct: 66 MIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVWNI---- 121
Query: 601 VMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYG 780
G +++ TF +Y + ++ K+ ++ + + CG T Y
Sbjct: 122 ----GVQKY-------------GTFQEYATIRDVDAIKIPKSMNMAAAAPVLCGGVTAY- 163
Query: 781 AALNTAKVEPGSNCAI 828
AL ++V+ G A+
Sbjct: 164 KALKESEVKSGQIVAV 179
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 36.3 bits (80), Expect = 0.046
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 295 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLXXXXXXXXXXX 465
L +E++ + P +V VK+ G+C +D +T P V P+++
Sbjct: 16 LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75
Query: 466 XXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 582
+K GD + C C+ C + NLC ++R
Sbjct: 76 GNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMR 114
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.061
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 295 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLXXXXXXXXXX 462
L +E+ + P +V VKI G+C +D + L+ G F P+VL
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVVSE 74
Query: 463 XXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 582
K GD + C C+ C + NLC +R
Sbjct: 75 IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMR 114
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 262 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 387
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 190 LISTFCDWQLSSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATG 366
L++ + S+ V + G+++ CL AW+ + + EVD + I
Sbjct: 50 LVARCLQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLN 109
Query: 367 VCHTDAYTLS 396
CH D + L+
Sbjct: 110 TCHEDFWNLA 119
>Z50756-2|CAA90638.1| 473|Caenorhabditis elegans Hypothetical
protein T08D10.3 protein.
Length = 473
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 136 LSDSDILLHHRVSAS*LDLISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIE 315
+ D++I L VS S +DL+ T CD + + V K + + + ++++ I
Sbjct: 353 IGDNEIFLIVNVSHSGVDLLLTTCDDEKIGLRRNVVFHEFKLSKSSPQLSEECINLQVIS 412
Query: 316 VDPPKAGEVRVKI 354
D P G++ V+I
Sbjct: 413 SDEPVNGQISVQI 425
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 9.3
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = -3
Query: 422 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 243
G++ G+ SV +S + T T+P+ STS SS +P+S A + P
Sbjct: 1533 GSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGP 1592
Query: 242 TVDMTALDNCQSQNVEIKSSYEALT 168
TV T + N S+ A T
Sbjct: 1593 TVATTQGSSSTQTNSNTGSTTVATT 1617
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 651 VEFLSFTAESPSAIWHHTLTL 589
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,529,787
Number of Sequences: 27780
Number of extensions: 432251
Number of successful extensions: 983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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