Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H03
(1370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.029
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.029
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.029
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.067
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.067
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.067
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.20
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.62
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.82
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.8
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 5.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.029
Identities = 34/133 (25%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 815 QGXXGXXFPLTXXVGTXXGPXGXFXGEX----PGXXXXPXGFPPXKXXXNFFXXXXGGGX 648
QG G G G G F G G GF + N F
Sbjct: 174 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 233
Query: 647 XGKNPPXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGG 468
G PP P G P PP PP G P PPP P GG
Sbjct: 234 AGSPPPPPPPKGSPPLAGSG------SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 467 XXXGPQKPNPXXP 429
P+ +P P
Sbjct: 288 SPPPPRAGSPPPP 300
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -1
Query: 563 PPXXGXXXXPPLXX-GKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVGXXFXPXKXSXX 387
PP PPL G P PPP P G P +P P G P +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 386 XP 381
P
Sbjct: 298 PP 299
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = -1
Query: 1094 PXXXAPPXXXFXXPPPXPXXXXXXXXXGXXPXGEKIFFFPXXGXXXQXXPRXRXPPXGLT 915
P +PP PPP P G P P G P PP G
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP------PRAGSPPPPPPPRGSPPTGSL 312
Query: 914 GGXXXXHPPPXGGXXXXXGKPXPXGXXXXPPXPQ 813
PPP G G P P G PP P+
Sbjct: 313 -------PPPQAG-----GSPPPAGTGSPPPPPR 334
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
G P P PP G PPPP G P P P +PP P
Sbjct: 235 GSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 29.5 bits (63), Expect = 5.8
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PPP PPP T P P P PP +
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXPRXK 805
PPP GG P P P PP PR K
Sbjct: 312 LPPPQAGGSPPPAGTGSP-------PPPPRQK 336
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.029
Identities = 34/133 (25%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 815 QGXXGXXFPLTXXVGTXXGPXGXFXGEX----PGXXXXPXGFPPXKXXXNFFXXXXGGGX 648
QG G G G G F G G GF + N F
Sbjct: 195 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 254
Query: 647 XGKNPPXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGG 468
G PP P G P PP PP G P PPP P GG
Sbjct: 255 AGSPPPPPPPKGSPPLAGSG------SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 467 XXXGPQKPNPXXP 429
P+ +P P
Sbjct: 309 SPPPPRAGSPPPP 321
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -1
Query: 563 PPXXGXXXXPPLXX-GKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVGXXFXPXKXSXX 387
PP PPL G P PPP P G P +P P G P +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 386 XP 381
P
Sbjct: 319 PP 320
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = -1
Query: 1094 PXXXAPPXXXFXXPPPXPXXXXXXXXXGXXPXGEKIFFFPXXGXXXQXXPRXRXPPXGLT 915
P +PP PPP P G P P G P PP G
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP------PRAGSPPPPPPPRGSPPTGSL 333
Query: 914 GGXXXXHPPPXGGXXXXXGKPXPXGXXXXPPXPQ 813
PPP G G P P G PP P+
Sbjct: 334 -------PPPQAG-----GSPPPAGTGSPPPPPR 355
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
G P P PP G PPPP G P P P +PP P
Sbjct: 256 GSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 29.5 bits (63), Expect = 5.8
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PPP PPP T P P P PP +
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXPRXK 805
PPP GG P P P PP PR K
Sbjct: 333 LPPPQAGGSPPPAGTGSP-------PPPPRQK 357
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.029
Identities = 34/133 (25%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 815 QGXXGXXFPLTXXVGTXXGPXGXFXGEX----PGXXXXPXGFPPXKXXXNFFXXXXGGGX 648
QG G G G G F G G GF + N F
Sbjct: 180 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 239
Query: 647 XGKNPPXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGG 468
G PP P G P PP PP G P PPP P GG
Sbjct: 240 AGSPPPPPPPKGSPPLAGSG------SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 467 XXXGPQKPNPXXP 429
P+ +P P
Sbjct: 294 SPPPPRAGSPPPP 306
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -1
Query: 563 PPXXGXXXXPPLXX-GKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVGXXFXPXKXSXX 387
PP PPL G P PPP P G P +P P G P +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 386 XP 381
P
Sbjct: 304 PP 305
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = -1
Query: 1094 PXXXAPPXXXFXXPPPXPXXXXXXXXXGXXPXGEKIFFFPXXGXXXQXXPRXRXPPXGLT 915
P +PP PPP P G P P G P PP G
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP------PRAGSPPPPPPPRGSPPTGSL 318
Query: 914 GGXXXXHPPPXGGXXXXXGKPXPXGXXXXPPXPQ 813
PPP G G P P G PP P+
Sbjct: 319 -------PPPQAG-----GSPPPAGTGSPPPPPR 340
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
G P P PP G PPPP G P P P +PP P
Sbjct: 241 GSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 29.5 bits (63), Expect = 5.8
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PPP PPP T P P P PP +
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXPRXK 805
PPP GG P P P PP PR K
Sbjct: 318 LPPPQAGGSPPPAGTGSP-------PPPPRQK 342
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.067
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PP PPP P + G G P P PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPIS---GGPP 759
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP GG P P P G PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 34.3 bits (75), Expect = 0.20
Identities = 33/113 (29%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +1
Query: 487 GPGXXGGGXGFPXXXGGXXXXPKXGGXPXKKIFXXXAXXGPKPXXGXXGGFXPXXPPPXK 666
GP G P GG P GG P GP P GG P PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP-------ISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 667 XXKKFXXXXXGGXPXGXXKXPGXSPXKXPXGPXXVPTXXVXGXXXPF--XPWG 819
K GG P PG P P +P V P PWG
Sbjct: 778 GGFK------GGPP--PPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWG 822
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNP 438
G PP G PP G PPP P P GG GP P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = -3
Query: 1083 GPPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXF 904
GPPP P P P GG G P P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 903 XXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP G P P AP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXP 429
G PP PP+ G P PPP G GG P P P
Sbjct: 725 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVG 420
G PP G PP+ G P PPP PG G P P P G
Sbjct: 712 GPPPPPGL---PPITGGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISG 756
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.067
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PP PPP P + G G P P PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPIS---GGPP 759
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP GG P P P G PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 34.3 bits (75), Expect = 0.20
Identities = 33/113 (29%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +1
Query: 487 GPGXXGGGXGFPXXXGGXXXXPKXGGXPXKKIFXXXAXXGPKPXXGXXGGFXPXXPPPXK 666
GP G P GG P GG P GP P GG P PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP-------ISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 667 XXKKFXXXXXGGXPXGXXKXPGXSPXKXPXGPXXVPTXXVXGXXXPF--XPWG 819
K GG P PG P P +P V P PWG
Sbjct: 778 GGFK------GGPP--PPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWG 822
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNP 438
G PP G PP G PPP P P GG GP P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = -3
Query: 1083 GPPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXF 904
GPPP P P P GG G P P PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 903 XXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP G P P AP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXP 429
G PP PP+ G P PPP G GG P P P
Sbjct: 725 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVG 420
G PP G PP+ G P PPP PG G P P P G
Sbjct: 712 GPPPPPGL---PPITGGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISG 756
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.067
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PP PPP P + G G P P PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPIS---GGPP 342
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP GG P P P G PP P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 34.3 bits (75), Expect = 0.20
Identities = 33/113 (29%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +1
Query: 487 GPGXXGGGXGFPXXXGGXXXXPKXGGXPXKKIFXXXAXXGPKPXXGXXGGFXPXXPPPXK 666
GP G P GG P GG P GP P GG P PPP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPP-------ISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 667 XXKKFXXXXXGGXPXGXXKXPGXSPXKXPXGPXXVPTXXVXGXXXPF--XPWG 819
K GG P PG P P +P V P PWG
Sbjct: 361 GGFK------GGPP--PPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWG 405
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNP 438
G PP G PP G PPP P P GG GP P P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGPPPPPP 372
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = -3
Query: 1083 GPPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXF 904
GPPP P P P GG G P P PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 903 XXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
PPPP G P P AP P
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXP 429
G PP PP+ G P PPP G GG P P P
Sbjct: 308 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVG 420
G PP G PP+ G P PPP PG G P P P G
Sbjct: 295 GPPPPPGL---PPITGGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISG 339
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.3 bits (75), Expect = 0.20
Identities = 37/147 (25%), Positives = 39/147 (26%), Gaps = 1/147 (0%)
Frame = +1
Query: 487 GPGXXGGGXGFPXXXGGXXXXPKXGGXPXKKIFXXXAXXGPKPXXGXXGGFXPXXPPPXK 666
GP GG P P G P + GP G F PPP +
Sbjct: 300 GPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGF--GAPPQGPPQGGPPQGSFGA--PPPQQ 355
Query: 667 XXKKFXXXXXGGXPXGXXKXPGXSPXKXPXGPXXVPTXXVXGXXXPFXPWGXGG-XXXXP 843
GG P PG GP P P G GG P
Sbjct: 356 FHAP-SPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
Query: 844 XGXGFPXXXXXPPXGGGWXXKXPPVXP 924
G G P P G G PP P
Sbjct: 415 GGPGAPGSYGPPQGGPGGFGPPPPGGP 441
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/76 (26%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = -1
Query: 827 PPXPQGXXGXXFPLTXXVGTXXGPXGX--FXGEXPGXXXXPXGFPPXKXXXNFFXXXXGG 654
PP G G P G GP G + PG P + P + F G
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Query: 653 GXXGKNPPXXPFXGFG 606
G PP F G
Sbjct: 440 GPGAYGPPPTGFPPVG 455
Score = 30.3 bits (65), Expect = 3.3
Identities = 41/165 (24%), Positives = 43/165 (26%), Gaps = 2/165 (1%)
Frame = -1
Query: 893 PPPXGGXXXXXGKPXPXGXXXXPPXPQGXXGXXFPL-TXXVGTXXGPXGXFXGEXPGXXX 717
PP G G P G P Q G P G P G G P
Sbjct: 289 PPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPP---Q 345
Query: 716 XPXGFPPXKXXXNFFXXXXGGGXXGKNPPXXPFXG-FGPFXAXXXKIFFXGXPPXXGXXX 540
G PP + F G PP G F P F P G
Sbjct: 346 GSFGAPPPQQ----FHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQ 401
Query: 539 XPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXPXVGXXFXP 405
P G PPP PG G GP P P + P
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 32.7 bits (71), Expect = 0.62
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 632 PXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXP 492
P P FGP A I G PP G PP PPP P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 0.82
Identities = 39/142 (27%), Positives = 41/142 (28%), Gaps = 5/142 (3%)
Frame = +1
Query: 604 GPKPXXGXXGGFXPXXPPPXKXXK-KF--XXXXXGGXPXGXXKXPGXSPXKXPXGPXXVP 774
G +P G G F P PP F G P G G P P GP
Sbjct: 309 GAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS 368
Query: 775 -TXXVXGXXXPFXPWGXGGXXXXPXGXGFPXXXXXPPXGGGWXXKXPP-VXPXGGXLXRG 948
G PF P G P G P PP GG P P GG
Sbjct: 369 GAPPSGGPPGPFDPSG-APPSGGPPGPFDP--SGAPPSGGPPGPFNPSGAPPSGGPPGPF 425
Query: 949 KXXFXXPXXGKKKIFSPXGXXP 1014
P G F+P G P
Sbjct: 426 NPSGAPPSGGPPGPFNPSGAPP 447
Score = 31.9 bits (69), Expect = 1.1
Identities = 39/150 (26%), Positives = 40/150 (26%), Gaps = 5/150 (3%)
Frame = +1
Query: 580 IFXXXAXXGPKPXXGXXGGFXPXXPPPXKXXKKF---XXXXXGGXPXGXXKXPGXSPXKX 750
+F G P G G F P PP G P G G P
Sbjct: 136 VFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGG 195
Query: 751 PXGP-XXVPTXXVXGXXXPFXPWGXGGXXXXPXGXGFPXXXXXPPXGGGWXXKXPP-VXP 924
P GP G PF P G P G P PP GG P P
Sbjct: 196 PPGPFNPSEAPPSGGPTGPFDPSG-APPSGGPPGPFNP--SGAPPSGGPPGPFDPSGAPP 252
Query: 925 XGGXLXRGKXXFXXPXXGKKKIFSPXGXXP 1014
GG P G F P G P
Sbjct: 253 SGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 282
Score = 30.7 bits (66), Expect = 2.5
Identities = 31/127 (24%), Positives = 33/127 (25%), Gaps = 1/127 (0%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXP-PPPXGGXPXPXXKTXPXGVXXXAPPXPRXKXXXX 793
G P F P + PP G F PP GG P P P G P
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPF---NPSGAPPSGGPPGPFDPSGA 250
Query: 792 SXNXXGXNXXXXXGXFPGGXPXXFXXPXGXSPPXXXXEFFXXFXGGGXXXXKPXXXPXXG 613
+ G P G P P G P F G P G
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP-SGAPPSGGPPGPFDPSG 309
Query: 612 FWPXXGP 592
P GP
Sbjct: 310 AQPSGGP 316
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXP-PPPXGGXPXPXXKTXPXGVXXXAPPXPRXKXXXX 793
G P F P PP G F PP GG P P P G P
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPF---GPSGAPPSGGPPGPFNPSEA 205
Query: 792 SXNXXGXNXXXXXGXFPGGXPXXFXXPXGXSP 697
+ G P G P P G P
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP 237
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXP-PPPXGGXPXPXXKTXPXGVXXXAPPXPRXKXXXX 793
G P F P PP G F PP GG P P P G P
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPF---NPSGAPPSGGPPGPFNPSGA 430
Query: 792 SXNXXGXNXXXXXGXFPGGXPXXFXXPXGXSP 697
+ G P G P P G P
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP 462
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXP-PPPXGGXPXPXXKTXPXGVXXXAPPXPRXKXXXX 793
G P F P PP G F PP GG P P P G P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPF---NPSGAPPSGGPPGPFDPSGA 370
Query: 792 SXNXXGXNXXXXXGXFPGGXPXXFXXPXGXSP 697
+ G P G P P G P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP 402
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXP-PPPXGGXPXPXXKTXPXGVXXXAPPXPRXKXXXX 793
G P F P PP G F PP GG P P P G P
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPF---NPSGAPPSGGPPGPFDPSGA 490
Query: 792 SXNXXGXNXXXXXGXFPGGXPXXFXXPXGXSP 697
+ G P G P P G P
Sbjct: 491 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = -3
Query: 969 GXPKXXFXPXKXPPXXXNXGXFXXPPPP---XGGXPXPXXKTXPXGVXXXAPPXP 814
G P F P K PP G PPP G P P G PP P
Sbjct: 731 GIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/83 (24%), Positives = 25/83 (30%)
Frame = -1
Query: 653 GXXGKNPPXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYX 474
G +P P P+ F PP PP G+ PPP P P +
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFG 328
Query: 473 GGXXXGPQKPNPXXPXVGXXFXP 405
G G P G + P
Sbjct: 329 MGPPRGFMPPPHPMMFRGGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/83 (24%), Positives = 25/83 (30%)
Frame = -1
Query: 653 GXXGKNPPXXPFXGFGPFXAXXXKIFFXGXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYX 474
G +P P P+ F PP PP G+ PPP P P +
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFG 328
Query: 473 GGXXXGPQKPNPXXPXVGXXFXP 405
G G P G + P
Sbjct: 329 MGPPRGFMPPPHPMMFRGGPYPP 351
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 3.3
Identities = 23/87 (26%), Positives = 23/87 (26%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PPP PPP P S G P P PP G
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPP 820
PPPP P P APP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 3.3
Identities = 23/87 (26%), Positives = 23/87 (26%)
Frame = -3
Query: 1080 PPPXXXXXPPPXTPXLXXPXXXXXXXXGGKNFFFSXXGXPKXXFXPXKXPPXXXNXGXFX 901
PPP PPP P S G P P PP G
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 900 XPPPPXGGXPXPXXKTXPXGVXXXAPP 820
PPPP P P APP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 563 PPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKPNPXXP 429
PP G PP G P PPP G PQ P P P
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPP-------PSGLGVAPQPPRPKTP 135
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKP 444
G PP G PP G PPP GP G G P
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 569 GXPPXXGXXXXPPLXXGKPXPPPXXPGPXXYXGGXXXGPQKP 444
G PP G PP G PPP GP G G P
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 502
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.5 bits (63), Expect = 5.8
Identities = 36/146 (24%), Positives = 38/146 (26%), Gaps = 3/146 (2%)
Frame = +1
Query: 487 GPGXXGGGXGFPXXXGGXXXXPKXGGXPXKKIFXXXAXXGPKPXXGXXGGFXPXXPPPXK 666
GP GG G P G + G P + GP G G P
Sbjct: 165 GPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPGAP 224
Query: 667 XXKKFXXXXXGGXPXGXXKXPGXSPXKXPXGPXXVPTXXVXGXXXPFXPWGXGGXXXXP- 843
G P G PG P GP P P P G G P
Sbjct: 225 GQVTETPGTPG--PAGAAGPPG------PPGPAGNPGSAGASEPGPAGPAGDAGPDGAPG 276
Query: 844 --XGXGFPXXXXXPPXGGGWXXKXPP 915
G P P GGG PP
Sbjct: 277 NAGAPGAPGEAGAPGSGGGCDHCPPP 302
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 945 PXKXPPXXXNXGXFXXPPPPXGGXPXPXXKTXPXGVXXXAPPXP 814
P PP + PPPP P P P GV PP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPP---PPPTMSKAPTGVPLPVPPPP 1380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,335,872
Number of Sequences: 27780
Number of extensions: 414224
Number of successful extensions: 1404
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3871284216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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