Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H02
         (1371 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095...    61   2e-09
03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191     61   2e-09

>03_05_0610 -
           26108546-26108671,26108739-26108789,26109410-26109542,
           26109633-26109682
          Length = 119

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 32/75 (42%), Positives = 42/75 (56%)
 Frame = +2

Query: 86  MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
           MQN+ G+ VDL  PRKCS +NR+I AKDH  V + I  VD   G        + + G IR
Sbjct: 1   MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59

Query: 266 RMGESDDCXVRLXKK 310
             G++D    RL +K
Sbjct: 60  AQGDADSALDRLWQK 74


>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
          Length = 82

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 32/75 (42%), Positives = 42/75 (56%)
 Frame = +2

Query: 86  MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
           MQN+ G+ VDL  PRKCS +NR+I AKDH  V + I  VD   G        + + G IR
Sbjct: 1   MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59

Query: 266 RMGESDDCXVRLXKK 310
             G++D    RL +K
Sbjct: 60  AQGDADSALDRLWQK 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,459,264
Number of Sequences: 37544
Number of extensions: 240910
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4329950544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)