Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H02
(1371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 110 1e-23
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 110 1e-23
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 110 1e-23
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 110 1e-23
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 110 1e-23
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 110 1e-23
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 107 9e-23
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 85 6e-16
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 65 6e-10
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 61 8e-09
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 61 8e-09
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 58 7e-08
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 110 bits (265), Expect = 1e-23
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILAXNY 334
RMGESDD +RL K DGI++ N+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 107 bits (257), Expect = 9e-23
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RMGESDDCXVRLXKKDGILA 325
RMGESDD +RL K DGI++
Sbjct: 61 RMGESDDSILRLAKADGIVS 80
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 85.0 bits (201), Expect = 6e-16
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIR 265
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 266 RM 271
RM
Sbjct: 61 RM 62
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 64.9 bits (151), Expect = 6e-10
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2
Query: 146 NRLIHAKDHGXVXLVIAXVDPXTGRAADTSKMYVVCGAIRRMGESDDCXVRLXK 307
NR+I AKDH + + +A VD TGR K Y +CGAIRRMGESDD +RL K
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 61.3 bits (142), Expect = 8e-09
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGR 220
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 61.3 bits (142), Expect = 8e-09
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIAXVDPXTGR 220
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 58.0 bits (134), Expect = 7e-08
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 86 MQNDAGEFVDLXCPRKCSVSNRLIHAKDHGXVXLVIA 196
MQNDAGEFVDL PRKCS SNR+I AKDH + + +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,499,798
Number of Sequences: 237096
Number of extensions: 1355876
Number of successful extensions: 1485
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19895715642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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