Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_H01
         (1315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     93   3e-19
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    80   3e-15
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           79   8e-15
07_01_1001 - 8460467-8460799                                           66   8e-11
07_03_0321 + 16757414-16757743                                         64   3e-10
01_06_0098 - 26416768-26416998                                         32   1.2  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 41/70 (58%), Positives = 59/70 (84%)
 Frame = +3

Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
           M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 297 KLSSMPVGGG 326
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 34/71 (47%), Positives = 53/71 (74%)
 Frame = +3

Query: 114 KMRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 293
           +M++++AYLLA L G   P+A D+  IL SVG E D  K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252

Query: 294 EKLSSMPVGGG 326
           EK +S+P GGG
Sbjct: 253 EKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 33/70 (47%), Positives = 53/70 (75%)
 Frame = +3

Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
           M++++AYL+A L G ++P A D+  IL SVG E D  K++ ++++++GKD+ +LIA GRE
Sbjct: 1   MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60

Query: 297 KLSSMPVGGG 326
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +3

Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60

Query: 297 KLSSMPVG 320
            L+   VG
Sbjct: 61  MLAFGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60

Query: 297 KLS 305
            L+
Sbjct: 61  MLA 63


>01_06_0098 - 26416768-26416998
          Length = 76

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 168 PAAXDVEKILSSVGIEADAEKLKKVITELNGKD 266
           P    V KI+ +V IEAD+ + K ++  L GKD
Sbjct: 16  PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,864
Number of Sequences: 37544
Number of extensions: 208515
Number of successful extensions: 441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4108797156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)