Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_H01
(1315 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 108 1e-23
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 108 1e-23
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 108 1e-23
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 108 1e-23
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 108 1e-23
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 31 3.5
BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p pro... 31 3.5
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 31 3.5
AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA... 31 3.5
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 108 bits (260), Expect = 1e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 297 KLSSMPVGGG 326
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 108 bits (260), Expect = 1e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 297 KLSSMPVGGG 326
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 108 bits (260), Expect = 1e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 297 KLSSMPVGGG 326
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 108 bits (260), Expect = 1e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 297 KLSSMPVGGG 326
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 108 bits (260), Expect = 1e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 117 MRYVAAYLLAVLGGKTTPAAXDVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 296
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 297 KLSSMPVGGG 326
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 295 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSXAAGVVLPPSTAS 140
S P++ S S S+ S +F S SAS S PT T+ AAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p
protein.
Length = 994
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 76 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 177
++AL +C LGL+ C+T + W+A+P P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 295 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSXAAGVVLPPSTAS 140
S P++ S S S+ S +F S SAS S PT T+ AAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA
protein.
Length = 988
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 76 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 177
++AL +C LGL+ C+T + W+A+P P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,260,183
Number of Sequences: 53049
Number of extensions: 313684
Number of successful extensions: 660
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7130586750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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