Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G19
(1354 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 38 0.018
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.13
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.23
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.30
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 33 0.69
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.92
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 2.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 3.7
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 3.7
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 30 4.9
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 5.8
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 6.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 8.6
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 37.9 bits (84), Expect = 0.018
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P PP P P P P P PPPPP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 499 PXP 491
P P
Sbjct: 426 PPP 428
Score = 37.9 bits (84), Expect = 0.018
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P PP P P P P P PPPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 499 PXP 491
P P
Sbjct: 430 PPP 432
Score = 36.7 bits (81), Expect = 0.043
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 667 GXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPPPXP 491
G PP P PP P P P P P PPPPPP P
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P PP P P P P PPPPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 499 PXP 491
P P
Sbjct: 425 PPP 427
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P P P P P P P PPPPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 499 PXP 491
P P
Sbjct: 429 PPP 431
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/63 (25%), Positives = 16/63 (25%)
Frame = -3
Query: 686 PXPXXXXXXPXPPXXXXXPXXXXXXPGXXXXXXGXXKXXPKPXPXSPGXXXXXXXXXTPP 507
P P P PP P P P P P P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 506 PPP 498
PPP
Sbjct: 427 PPP 429
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.1 bits (77), Expect = 0.13
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP PP P G P P P G P PPPPP
Sbjct: 936 PPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAP---PLPPPPGGSAPPPPPPPPPPP 992
Query: 499 P 497
P
Sbjct: 993 P 993
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 34.3 bits (75), Expect = 0.23
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXX---PXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPP 509
P G P PP P PP P +P P G P PP
Sbjct: 146 PATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205
Query: 508 PPPP 497
PPPP
Sbjct: 206 PPPP 209
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.9 bits (74), Expect = 0.30
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = -1
Query: 661 PXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQN-PXPXPRGXXXXXXPXXPPPPPPXP 491
P PP P PP P N P P P P P PPPP P
Sbjct: 97 PPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNP 154
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P PP P P P P P P PPP
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPP--PNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPP 206
Query: 499 PXP 491
P P
Sbjct: 207 PNP 209
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 652 PPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPPP 497
PP P PP P P P P P P PPPP
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 32.7 bits (71), Expect = 0.69
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 492 GXGGGGGGXXGXXXXXXPRGXGXGFWXXFXXPXXXXXXXGXXGGXXGXXXXXGGXXG 662
G GGGGGG G G G GF G GG G GG G
Sbjct: 812 GGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGG 868
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 492 GXGGGGGGXXGXXXXXXPRGXGXGFWXXFXXPXXXXXXXGXXGGXXGXXXXXGGXXG 662
G GGGGGG G G G G + G GG G GG G
Sbjct: 814 GGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGG 870
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 32.3 bits (70), Expect = 0.92
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 568 QNPXPXPRGXXXXXXPXXPPPPPPXP 491
+ P P PR P PPPPPP P
Sbjct: 858 RRPRPRPRRPPPPPPPPPPPPPPPPP 883
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -1
Query: 622 PPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPPPXP 491
PP P P P P P PPPPPP P
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPP 720
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 568 QNPXPXPRGXXXXXXPXXPPPPPPXP 491
Q P P P P PPPPPP P
Sbjct: 462 QAPPPPPPPPPPPPPPPPPPPPPPPP 487
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFP 489
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 473 PPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPP 500
P P PP P PP P +P P P PPPPP
Sbjct: 97 PACCAPPPPPPPPPPPPPPPPPPPITLHHEQHVVSHVMHPAPPP-----------PPPPP 145
Query: 499 PXP 491
P P
Sbjct: 146 PAP 148
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPP- 503
P G P PP P PP + Q P P RG PPP
Sbjct: 299 PPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPV 358
Query: 502 ----PPXP 491
PP P
Sbjct: 359 GGAAPPPP 366
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = -1
Query: 667 GXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPPPPXP 491
G PP P PP P P G P PPPPP P
Sbjct: 342 GGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPP 400
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXP-RGXXXXXXPXXPPPP 503
P P PP P PP P P P P G P PPP
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPP--PTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPP 406
Query: 502 PPXP 491
PP P
Sbjct: 407 PPPP 410
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.9 bits (64), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 1163 PPPPPPSSPSPPPPPPPPPPPPTP 1186
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPPP 1181
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPPPPP 1183
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 1161 PPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 492 GXGGGGGGXXGXXXXXXPRGXGXGF 566
G GGGGGG G RG G GF
Sbjct: 342 GGGGGGGGGGGGGGGGGGRGGGGGF 366
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = -1
Query: 679 PXXXGXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXPPPP- 503
P P P P PP P G P PRG P PPPP
Sbjct: 436 PPQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRG--FPPPPFGPPPPF 493
Query: 502 ---PPXP 491
PP P
Sbjct: 494 YRGPPPP 500
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 24.6 bits (51), Expect(2) = 5.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPP 497
P P P G P PPPPPP
Sbjct: 305 PPPLPAGV-----PAPPPPPPP 321
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 514 PPPPPPXP 491
PPPPPP P
Sbjct: 315 PPPPPPPP 322
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = -1
Query: 667 GXPXXPPXXXXXPXXPPXXPXXXXXXXGXXKXXQNPXPXPRGXXXXXXPXXP----PPPP 500
G P P PP P Q P P P P P PPPP
Sbjct: 267 GHPPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPP 326
Query: 499 PXP 491
P P
Sbjct: 327 PPP 329
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 25.4 bits (53), Expect(2) = 6.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 523 PXXPPPPPPXP 491
P PPPPPP P
Sbjct: 693 PPPPPPPPPQP 703
Score = 22.2 bits (45), Expect(2) = 6.7
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -1
Query: 568 QNPXPXPRGXXXXXXPXXPPPPP 500
Q P P P PPPPP
Sbjct: 679 QTMVPPPPPPPPPPPPPPPPPPP 701
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 562 PXPXPRGXXXXXXPXXPPPPPPXP 491
P P P P PPPPPP P
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPP 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,644,850
Number of Sequences: 59808
Number of extensions: 178401
Number of successful extensions: 2394
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4317916110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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