Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G12
         (1406 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    33   0.41 
04_03_0904 + 20717005-20718087                                         32   0.94 

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 31/129 (24%), Positives = 35/129 (27%)
 Frame = -1

Query: 1379 PXXPXXXHXXXXXTXPPPXPPTXKXXXXXYPLXPXXXXXXRXXPPXPXXPXXXXTXSXLX 1200
            P  P   H       PPP PP+        P  P         PP P  P    + +   
Sbjct: 623  PPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKF-PAPPPPPPPPRSSSRTPTG 681

Query: 1199 XTXXXXGPPXLXXXPRXXXXPXXPXXXPXIXXXSPPXX*KXXXCPPPXNXTXXSXLPX*X 1020
                  GPP     P     P      P +    PP        PPP      S  P   
Sbjct: 682  AATSSKGPP---PPPPPPLPPANRTNGPGVPSAPPP--------PPPPPPANRSNGPSAP 730

Query: 1019 PXPLXXPXP 993
              PL  P P
Sbjct: 731  APPLPPPLP 739



 Score = 29.5 bits (63), Expect = 6.7
 Identities = 30/129 (23%), Positives = 31/129 (24%), Gaps = 2/129 (1%)
 Frame = -1

Query: 1379 PXXPXXXHXXXXXTXPPPXPPTXKXXXXXYPLXPXXXXXX--RXXPPXPXXPXXXXTXSX 1206
            P  P   +       PPP PP         P  P        R  PP P  P      S 
Sbjct: 573  PPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSV 632

Query: 1205 LXXTXXXXGPPXLXXXPRXXXXPXXPXXXPXIXXXSPPXX*KXXXCPPPXNXTXXSXLPX 1026
            L        PP L    R    P  P          PP          P      S  P 
Sbjct: 633  LPPPPPPPPPPSLPN--RLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPP 690

Query: 1025 *XPXPLXXP 999
              P P   P
Sbjct: 691  PPPPPPLPP 699


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 38/168 (22%), Positives = 42/168 (25%), Gaps = 4/168 (2%)
 Frame = -1

Query: 1379 PXXPXXXHXXXXXTXPPPXPPTXKXXXXXYPLXPXXXXXXRXXPPXPXXPXXXXTXSXLX 1200
            P  P   H     T P P P          P  P            P  P    T +   
Sbjct: 61   PEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPK 120

Query: 1199 XTXXXXGPPXLXXXPRXXXXPXXPXXXPXIXXX----SPPXX*KXXXCPPPXNXTXXSXL 1032
             T     PP     P+    P  P   P         +PP   K    P P   T     
Sbjct: 121  PT-----PPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTP 175

Query: 1031 PX*XPXPLXXPXPLLXPXTPLXSXKXXXXLNYXXXRXTXXSKXHKPXP 888
            P   P P   P P     TP  S K            T     +KP P
Sbjct: 176  PSYKPQPKPTPTPYTPTPTP-PSYKPQPKPTPTPYTPTPTPPSYKPQP 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,118,677
Number of Sequences: 37544
Number of extensions: 179087
Number of successful extensions: 168
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4443607364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)