Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G11
(1309 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 70 4e-12
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 70 4e-12
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 50 3e-06
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 50 5e-06
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 50 5e-06
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 50 5e-06
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 48 1e-05
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 37 0.027
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 36 0.063
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 34 0.25
AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical ... 34 0.25
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 31 2.4
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 31 2.4
U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical pr... 30 4.1
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 29 5.5
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 29 5.5
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 29 5.5
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 29 9.6
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 29 9.6
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 69.7 bits (163), Expect = 4e-12
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +3
Query: 189 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 365
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 366 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 545
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKFSD-D 139
Query: 546 EADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 650
A L+PAK+ N R P VI++YE +LT P DE
Sbjct: 140 TARLLPAKEVNSRYPSQVIRYYESKLTIQDPKADE 174
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEE 617
EK++ T +G FL++WQG E+D + N++C +++ +F E
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFERE 69
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 69.7 bits (163), Expect = 4e-12
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +3
Query: 189 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 365
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 366 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 545
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKFSD-D 139
Query: 546 EADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 650
A L+PAK+ N R P VI++YE +LT P DE
Sbjct: 140 TARLLPAKEVNSRYPSQVIRYYESKLTIQDPKADE 174
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEE 617
EK++ T +G FL++WQG E+D + N++C +++ +F E
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFERE 69
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 50.4 bits (115), Expect = 3e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +3
Query: 189 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 308
VL++R+ G EYY+KW+G+ + + +WEP +NL C +IQ
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
Score = 49.2 bits (112), Expect = 6e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +3
Query: 483 IIGATDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERL 623
IIG T + GEL FL K+ D L+P ++ANVR P VI+FYE RL
Sbjct: 125 IIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKFYETRL 170
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 50.4 bits (115), Expect = 3e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +3
Query: 189 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 308
VL++R+ G EYY+KW+G+ + + +WEP +NL C +IQ
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
Score = 49.2 bits (112), Expect = 6e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +3
Query: 483 IIGATDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERL 623
IIG T + GEL FL K+ D L+P ++ANVR P VI+FYE RL
Sbjct: 125 IIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKFYETRL 170
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 49.6 bits (113), Expect = 5e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +3
Query: 189 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 365
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 366 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 545
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 546 EADLVPAKQANVR 584
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEE 617
EK++ T +G FL++WQG E+D + N++C +++ +F E
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFERE 69
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 49.6 bits (113), Expect = 5e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +3
Query: 189 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 365
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 366 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 545
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 546 EADLVPAKQANVR 584
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEE 617
EK++ T +G FL++WQG E+D + N++C +++ +F E
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFERE 69
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 49.6 bits (113), Expect = 5e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +3
Query: 189 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 365
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 366 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 545
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 546 EADLVPAKQANVR 584
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEE 617
EK++ T +G FL++WQG E+D + N++C +++ +F E
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFERE 69
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 189 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 308
+L+ R K G E+Y+KW GY N+WEP++N+ P LI+
Sbjct: 13 ILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIE 52
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 37.1 bits (82), Expect = 0.027
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 195 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLD-CPDL 302
D+R ++ Y + W+GY ++ TWEPE+NL+ C +L
Sbjct: 42 DKR-RHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.063
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 189 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 287
+L ++ + +L ++W GY +++TWEPE++L
Sbjct: 29 ILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 33.9 bits (74), Expect = 0.25
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 225 YYLKWKGYSDEDNTWEPEDNLDCPDLI 305
+ +KW GY +++ TWEPE N+ PD +
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI--PDSV 119
>AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical
protein K10B4.4 protein.
Length = 403
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 680 SHTYLVFIISF-IECWCVPCEPFFIKLNNYLWAPHISLFCWYKICFICSLP 531
S+ ++ I F E W C P K+ + LW ++ + + I F+C+LP
Sbjct: 117 SYASIMIICCFSFERWLAICHPLRSKIFSTLWRANVLIILAWTISFVCALP 167
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 1.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 222 EYYLKWKGYSDEDNTWEPEDNL 287
++++KW G+S NTWE E++L
Sbjct: 238 QFFVKWTGWSHLHNTWESENSL 259
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 30.7 bits (66), Expect = 2.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 734 KVSLLKINTDTDIRNPVRSHTYLVFIISFIECWCVPCE 621
K +L++ +D +R H + I+ F WC PC+
Sbjct: 5 KEPILELADMSDFEQLIRQHPEKIIILDFYATWCGPCK 42
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 30.7 bits (66), Expect = 2.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 734 KVSLLKINTDTDIRNPVRSHTYLVFIISFIECWCVPCE 621
K +L++ +D +R H + I+ F WC PC+
Sbjct: 5 KEPILELADMSDFEQLIRQHPEKIIILDFYATWCGPCK 42
>U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical
protein T07F12.2 protein.
Length = 220
Score = 29.9 bits (64), Expect = 4.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 935 C*LPLHQVDYMLFCHQS 985
C LPLHQ+D++ F H S
Sbjct: 2 CNLPLHQIDFLFFIHNS 18
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -3
Query: 725 LLKINTDTDIRNPVRSHTYLVFIISFIECWCVPCE---PFFIKLNN-YLWA 585
++ + D D RN + I+ F WC PC+ P F L+N YL A
Sbjct: 3 VINVKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGA 53
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -3
Query: 725 LLKINTDTDIRNPVRSHTYLVFIISFIECWCVPCE---PFFIKLNN-YLWA 585
++ + D D RN + I+ F WC PC+ P F L+N YL A
Sbjct: 3 VINVKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGA 53
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -3
Query: 725 LLKINTDTDIRNPVRSHTYLVFIISFIECWCVPCE---PFFIKLNN-YLWA 585
++ + D D RN + I+ F WC PC+ P F L+N YL A
Sbjct: 3 VINVKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGA 53
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 704 TDIRNPVRSHTYLVFIISFIECWCVPCE 621
+D +R H + I+ F WC PC+
Sbjct: 16 SDFEQLIRQHPEKIIILDFYATWCGPCK 43
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 704 TDIRNPVRSHTYLVFIISFIECWCVPCE 621
+D +R H + I+ F WC PC+
Sbjct: 16 SDFEQLIRQHPEKIIILDFYATWCGPCK 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,058,349
Number of Sequences: 27780
Number of extensions: 425455
Number of successful extensions: 985
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3652743978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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