Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G10
(1363 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0630 + 26260159-26260272,26260520-26260894 32 1.2
02_05_0686 - 30900748-30902167,30903442-30904742 32 1.2
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.6
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 31 1.6
06_02_0126 + 12130409-12130532,12131015-12131373 31 2.1
06_02_0149 - 12289491-12289928 31 2.8
12_02_1114 - 26171876-26172493 30 3.7
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 3.7
09_04_0506 - 18188785-18190599 30 4.9
02_01_0400 - 2922837-2923060,2923280-2923367,2923422-2923473,292... 25 6.2
12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179 29 6.4
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 6.4
10_08_0221 - 15980370-15980927 29 6.4
06_01_0760 - 5676973-5677830 29 6.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.4
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 29 6.4
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 29 6.4
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 29 8.5
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 29 8.5
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955 29 8.5
10_08_0217 - 15962192-15962884 29 8.5
06_01_0690 + 5033943-5034740 29 8.5
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 8.5
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG-XXSXFXAHELXXXGRPXGGXGXXXXQXGXIXG 904
G GGGGGG+ G G GG G + GR GG G + G G
Sbjct: 95 GYGGGGGGYGGGRGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGGGYGGSRGGGYGG 154
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = +3
Query: 999 VXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXG 1178
V PPP P K P P K PP P G P P P P G
Sbjct: 308 VASPAPPPPPPPK---PAAAAPPPPPPPKAAPPPP-PPKGPPPPPPAKGPPPPPPPKGPS 363
Query: 1179 GLXXPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P G PP G P P
Sbjct: 364 PPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 1.6
Identities = 33/104 (31%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Frame = -1
Query: 1267 GPXGXXGFXPP--PXGGXPPXXXXXR--XGXXXPPXPXGKGXXXXXTXGXXXGXPGG--- 1109
GP G G PP GG PP G PP P G G G GG
Sbjct: 99 GPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALA 158
Query: 1108 -XPGGXXXXFXVPLGFPPXXXGXXFFDG-XXGGGXXWXTPXHXP 983
PGG LG PP G G GGG P P
Sbjct: 159 RPPGGGRGG---ALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAP 199
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGGG G GG G A EL G GG G
Sbjct: 278 GGGGGGGALENAREDGAEGGGGGGGGGGGGGHGAPELGFSGGGGGGGG 325
Score = 29.9 bits (64), Expect = 4.9
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 10/85 (11%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGX-----PPGXPXXXPXVXXXXXPXPXGXG 1178
P P P GG P PPG PP P P P G G
Sbjct: 80 PRPLPIKLLGLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGG 139
Query: 1179 GLXXPXRXXXXXGG-----XPPXGG 1238
G P R GG PP GG
Sbjct: 140 GGGAPRRVLGGGGGGGALARPPGGG 164
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/83 (27%), Positives = 27/83 (32%)
Frame = +2
Query: 548 GGXXGXKXXXIXGXXGTXHX*XAGKKRLXWXNWGGYGXXGXHXXRXXXXXQXQWXPFXVX 727
GG G G G G + GG G G R + +
Sbjct: 105 GGGRGGYRGDGDGGYGRGGGGYHGDGERGYGRGGGGGGGGGGGYRGDDEGRSSYG--RAR 162
Query: 728 GXGGGGGGFXGXNXXAXXXGRGG 796
G GGGGGG+ G GRGG
Sbjct: 163 GGGGGGGGYHGDGEAGYGRGRGG 185
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGG 865
G GGGGGG+ G + GR G + GR GG
Sbjct: 140 GGGGGGGGYRGDDEGRSSYGRARGGGGGGGGYHGDGEAGYGRGRGG 185
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGG GG+ G G GG G + GR GG G
Sbjct: 88 GYGGGYGGYGGGYGGGYGGGGGGGGYGGYGGYGGGGYEGYGRGYGGGG 135
>06_02_0149 - 12289491-12289928
Length = 145
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 158 KSRGRPKKRWLDVV*ADVEENHLTEKDXEDRAKWRSXVGXXG 33
K RGRP+KR +D V E +LTE D D A ++ G G
Sbjct: 32 KRRGRPQKRIVDKVVDQAEAKNLTEGDDGD-ADYQQGEGEDG 72
>12_02_1114 - 26171876-26172493
Length = 205
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHEL 838
G GGGGGG G G GG G + +H++
Sbjct: 61 GSGGGGGGGGGGGGGGGGGGGGGGGGGSWREYSSHDI 97
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG 808
G GGGGGG+ G GRGG G
Sbjct: 70 GYGGGGGGYGGGGGGYGGGGRGGGGGG 96
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGGGG+ G G GG G + GR GG G
Sbjct: 54 GGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGG-----GGRGGGGGG 96
>09_04_0506 - 18188785-18190599
Length = 604
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGG G G GRGG MG A + P GG G
Sbjct: 314 GGGGGGPGGGGGGGGGGNWGRGGGGMGGRG--QAGNMRNRMGPVGGRG 359
>02_01_0400 -
2922837-2923060,2923280-2923367,2923422-2923473,
2924133-2924206,2924298-2924395,2924650-2924719
Length = 201
Score = 24.6 bits (51), Expect(2) = 6.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 713 PFXVXGXGGGGGG 751
PF G GGGGGG
Sbjct: 144 PFRFGGGGGGGGG 156
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 728 GXGGGGGGFXGXN 766
G GGGGGG G N
Sbjct: 148 GGGGGGGGGGGSN 160
>12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179
Length = 528
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGG 796
G GGGGGG G N A G GG
Sbjct: 123 GGGGGGGGGHGGNEVAARDGGGG 145
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 698 QXQWXPFXVXGXGGGGGGFXGXNXXAXXXGRGGXXMG 808
Q Q+ V G GGGGGGF A G G G
Sbjct: 156 QQQFDELGVGGGGGGGGGFDAEALAAAAVGEEGASGG 192
>10_08_0221 - 15980370-15980927
Length = 185
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGGGG G N + G G S ++ G GG G
Sbjct: 31 GGGGGGGGGGGSNGGSGWGSGSGSGYGQASGDGSYASGDGGGGGGGGG 78
>06_01_0760 - 5676973-5677830
Length = 285
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGGGG G + G G G + + G GG G
Sbjct: 116 GGGGGGGGQNGGSGYGSGFGSGYGQAGGYGPYGGNAYAQGGGQGGGGG 163
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 6.4
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 1/96 (1%)
Frame = +3
Query: 984 GXWXGVXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPX 1163
G G PPP P+ P +P PP PP P P
Sbjct: 313 GAGAGTGAPPPPPAHPAAPAPPPP-APSPSAAGAGSGPPPPPPPAAP---------AAPR 362
Query: 1164 PXGXG-GLXXPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P G G G P GG PP P P GP
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPP-----PALPGGP 393
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/73 (24%), Positives = 18/73 (24%)
Frame = +3
Query: 1101 PGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNPXXPXGPXREX 1280
P PP P P G G P P G G P P G
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRG 380
Query: 1281 XXXPXXXIXPGXP 1319
P PG P
Sbjct: 381 GGGPPPPALPGGP 393
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG 808
G GGGGGG G + G GG MG
Sbjct: 22 GGGGGGGGGVGGDRGGGGSGGGGPGMG 48
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG 808
G GGGGGG G + G GG MG
Sbjct: 18 GGGGGGGGGGGVDPAGGGSGGGGPGMG 44
>12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 29.1 bits (62), Expect = 8.5
Identities = 22/89 (24%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Frame = -2
Query: 1257 GXXGXXPPPXGGXXPXXXPPXXVXXXPPSXXXKAXXXXXXPXGTGGXPGGXXGXXPGFXX 1078
G G PPP G PP P K G GG G P
Sbjct: 18 GGYGAPPPPYGSSPAPSAPPYGA---KPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYGSG 74
Query: 1077 SXWGSPP--XXWGXXFLMXXXGAGPXGKP 997
+G+PP +G + + P G P
Sbjct: 75 GGYGAPPSSQPYGAPYGAPPPSSAPYGAP 103
>11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = -2
Query: 1257 GXXGXXPPPXGGXXPXXXPPXXVXXXPPSXXXKAXXXXXXPXGTGGXPGGXXGXXPGFXX 1078
G G PPP G PP P K G GG G P
Sbjct: 18 GGYGAPPPPYGSSPAPSAPP---YGEKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYGSG 74
Query: 1077 SXWGSPPXXWGXXFLMXXXGAGPXGKP---PXTXPFXGSWPF 961
+G+PP GA P +P P P S P+
Sbjct: 75 GGYGAPPSTQRPQSYGGGYGAPPSSQPYGAPYGAPPPSSAPY 116
>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
Length = 184
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGG 865
G GGGGGG G N + G G S A+ G GG
Sbjct: 31 GGGGGGGGGGGSNGGSGWGSGSGSGYGQASGGGAYASGGGGAGGGG 76
>10_08_0217 - 15962192-15962884
Length = 230
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 734 GGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
GGGGGG+ G + G G G + G+ GG G
Sbjct: 158 GGGGGGYNGGSGYGSGSGSGYGQAGSYGPYGGGYAHAGGQGGGGGG 203
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXG 871
G GGGGGG G + G G G + + G GG G
Sbjct: 73 GGGGGGGGGNGGSGYGSGSGSGYGQAGGYGPYGGYAQGGGGGGGGGGG 120
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 734 GGGGGGFXGXNXXAXXXGRGGXXMG 808
GGGGGGF G G GG +G
Sbjct: 334 GGGGGGFPGGGCGGITGGDGGGVVG 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,825,092
Number of Sequences: 37544
Number of extensions: 554915
Number of successful extensions: 4882
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3568
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4295031588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -