Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G10
         (1363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    28   0.54 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   4.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   8.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   8.8  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 0.54
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = +3

Query: 1101 PGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNP 1250
            PG  PG P   P +     P P    G+  P        G PP G G  P
Sbjct: 89   PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTM-GMPPMGLGMRP 137


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 21.8 bits (44), Expect(2) = 4.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 728 GXGGGGGGFXGXNXXA 775
           G GGGGGG  G    A
Sbjct: 562 GGGGGGGGRAGGGVGA 577



 Score = 21.4 bits (43), Expect(2) = 4.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 722 VXGXGGGGGG 751
           + G GGGGGG
Sbjct: 559 IGGGGGGGGG 568


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG 808
           G GGGGGG  G        G G   +G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLG 677


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 8.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 713 PFXVXGXGGGGGGFXG 760
           P  V G GGGGGG  G
Sbjct: 543 PAGVGGGGGGGGGGGG 558


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 8.8
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +2

Query: 998  GXPXGPAPXXXIKKXXPXXXGGEPQXDXKXPGXXPXXPPGXP 1123
            G P GP          P   G   Q     PG     PPG P
Sbjct: 184  GMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVP 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 945,910
Number of Sequences: 2352
Number of extensions: 17592
Number of successful extensions: 124
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 156868470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)