Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G10
(1363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.016
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.029
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.029
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.029
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 35 0.15
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.20
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 34 0.20
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.27
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 33 0.35
Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.82
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.82
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 32 0.82
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 32 0.82
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 1.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.9
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 2.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 3.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 3.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 3.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 3.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 3.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 3.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 4.4
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 4.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 4.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 30 4.4
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.6
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 7.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 7.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 7.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 7.6
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 7.6
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.9 bits (84), Expect = 0.016
Identities = 30/88 (34%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Frame = -1
Query: 1267 GPXGXXGFXPPPXGGXPPXXXXXRXGXXXPPXPXGKGXXXXXTXGXXXGXPGGX----PG 1100
GP G F PPP P G PP P G G + G G PGG PG
Sbjct: 385 GPPG--AFAPPPSAFGAPQGPGG-PGGYGPPPPGGPGAPG--SYGPPQGGPGGFGPPPPG 439
Query: 1099 GXXXXFXVPLGFPPXXXGXXFFDGXXGG 1016
G P GFPP G GG
Sbjct: 440 GPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
Score = 32.3 bits (70), Expect = 0.82
Identities = 26/83 (31%), Positives = 29/83 (34%), Gaps = 9/83 (10%)
Frame = -1
Query: 1318 GXPGXXFXXGXXXXSRXGPXGXXGFXPPPXG--GXPPXXXXXR--XGXXXPPXPXGKGXX 1151
G PG + GP G G+ PPP G G P + G PP P G G
Sbjct: 385 GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Query: 1150 XXXTXG-XXXGXP----GGXPGG 1097
G G P G PGG
Sbjct: 445 GPPPTGFPPVGAPPPGAAGAPGG 467
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.029
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 11/130 (8%)
Frame = +3
Query: 963 RARNXXKGXWXGVXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXPP---GXPPGXPXXX 1133
+ +N +G PPP P K P G+P PP G PP P
Sbjct: 220 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 279
Query: 1134 PXVXXXXXPXPXGXGGL---XXPXRXXXXXGGXPPXGGGXNP-----XXPXGPXREXXXX 1289
P P G P R G PP G +P P P R+
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 1290 PXXXIXPGXP 1319
P G P
Sbjct: 340 PERSPPTGSP 349
Score = 33.1 bits (72), Expect = 0.47
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXP--XXXPXVXXXXXPXPXGXGGLXX 1190
PP P+ P GG+P PP P G P P P P G G
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 1191 PXR-XXXXXGGXPPXGGGXNPXXPXG 1265
P R PP G P G
Sbjct: 332 PPRQKRQAPERSPPTGSPPTGSPPTG 357
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.029
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 11/130 (8%)
Frame = +3
Query: 963 RARNXXKGXWXGVXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXPP---GXPPGXPXXX 1133
+ +N +G PPP P K P G+P PP G PP P
Sbjct: 241 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 300
Query: 1134 PXVXXXXXPXPXGXGGL---XXPXRXXXXXGGXPPXGGGXNP-----XXPXGPXREXXXX 1289
P P G P R G PP G +P P P R+
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 1290 PXXXIXPGXP 1319
P G P
Sbjct: 361 PERSPPTGSP 370
Score = 33.1 bits (72), Expect = 0.47
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXP--XXXPXVXXXXXPXPXGXGGLXX 1190
PP P+ P GG+P PP P G P P P P G G
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 1191 PXR-XXXXXGGXPPXGGGXNPXXPXG 1265
P R PP G P G
Sbjct: 353 PPRQKRQAPERSPPTGSPPTGSPPTG 378
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.029
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 11/130 (8%)
Frame = +3
Query: 963 RARNXXKGXWXGVXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXPP---GXPPGXPXXX 1133
+ +N +G PPP P K P G+P PP G PP P
Sbjct: 226 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 285
Query: 1134 PXVXXXXXPXPXGXGGL---XXPXRXXXXXGGXPPXGGGXNP-----XXPXGPXREXXXX 1289
P P G P R G PP G +P P P R+
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 1290 PXXXIXPGXP 1319
P G P
Sbjct: 346 PERSPPTGSP 355
Score = 33.1 bits (72), Expect = 0.47
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXP--XXXPXVXXXXXPXPXGXGGLXX 1190
PP P+ P GG+P PP P G P P P P G G
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 1191 PXR-XXXXXGGXPPXGGGXNPXXPXG 1265
P R PP G P G
Sbjct: 338 PPRQKRQAPERSPPTGSPPTGSPPTG 363
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 34.7 bits (76), Expect = 0.15
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = -2
Query: 1257 GXXGXXPPPXGGXX-PXXXPPXXVXXXPPSXXXKAXXXXXXPXGTGGXPGGXXGXXPGFX 1081
G G PP GG P PP P P G GG P G G PG
Sbjct: 280 GMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPG-MPGMQ 338
Query: 1080 XSXWGSPP 1057
G PP
Sbjct: 339 GGYPGGPP 346
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical protein
T11F9.9 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.20
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGSPGQDGQPGAPGNKGPSGQNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical protein
F55C10.3 protein.
Length = 266
Score = 34.3 bits (75), Expect = 0.20
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGX-GGLXX 1190
P P + P G GNP + P PP P P P G GG
Sbjct: 78 PGKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGN 137
Query: 1191 PXRXXXXX-----GGXPPXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
P G P G NP P P + P I PG P
Sbjct: 138 PGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 185
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical protein
F55C10.2 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.20
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGX-GGLXX 1190
P P + P G GNP + P PP P P P G GG
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGN 170
Query: 1191 PXRXXXXX-----GGXPPXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
P G P G NP P P + P I PG P
Sbjct: 171 PGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 34.3 bits (75), Expect = 0.20
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXP---XXXPXVXXXXXPXPXGXGGL 1184
P P PS P G +P G P G P P P P P G G
Sbjct: 991 PSPNGPSDPVKPSPSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNGPSPNGPNGP 1050
Query: 1185 XXPXRXXXXXGGXP--PXGGGXN-PXXPXGPXREXXXXPXXXIXPGXP 1319
P + P P G N P P P + P P P
Sbjct: 1051 SDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKP 1098
Score = 31.5 bits (68), Expect = 1.4
Identities = 25/102 (24%), Positives = 27/102 (26%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P PS P G +P G P G P P P P G G P
Sbjct: 1012 PSPNGPSPNG-PSPNGPSPNGPTPNWPSPNGPSPNGPNGP---SDPNKPGPNGPNGPSDP 1067
Query: 1194 XRXXXXXGGXPPXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
+ P P P GP P P P
Sbjct: 1068 NKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDP 1109
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.27
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
PPP P P G K PPG PPG P G GG P
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQGNKGPLGPPG-PPGPEGPNGTAGNKGPAGPPGPGGKPGP 190
Query: 1194 XRXXXXXG--GXPPXGGGXNPXXPXGP 1268
G G P G P P P
Sbjct: 191 AGPPGENGRNGEPQPGSPGEPGRPGQP 217
Score = 29.5 bits (63), Expect = 5.8
Identities = 26/91 (28%), Positives = 27/91 (29%), Gaps = 7/91 (7%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXG-----GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGG 1181
PP P + P G GNP K P PP P P P G G
Sbjct: 97 PPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKG 156
Query: 1182 LXXPXRXXXXXGGXPPXG--GGXNPXXPXGP 1268
P G P G G P P GP
Sbjct: 157 ---PLGPPGPPGPEGPNGTAGNKGPAGPPGP 184
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
PPP P P G K PPG PPG P G GG P
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPG-PPGPEGPNGEPGNKGPAGPPGPGGKPGP 192
Query: 1194 XRXXXXXG--GXPPXGGGXNPXXPXGP 1268
G G P G P P P
Sbjct: 193 AGPPGENGNNGEPQPGAPGEPGQPGQP 219
Score = 29.1 bits (62), Expect = 7.6
Identities = 25/90 (27%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXG-----GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGG 1181
PP P P G GNP K P PP P P P G G
Sbjct: 99 PPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKG 158
Query: 1182 LXXPXRXXXXXG--GXPPXGGGXNPXXPXG 1265
P G G P G P P G
Sbjct: 159 PLGPPGPPGPEGPNGEPGNKGPAGPPGPGG 188
>Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical
protein F59A1.3 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.82
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 112 AYTTSNQRFLGLPRDFRPCYAEVESFIFAVIWLPVSFHNVY-VLSLTKEDLTVVCSKIYS 288
AY ++ LGLPR Y + +++I L + FH +Y L++ K +++ + S Y
Sbjct: 71 AYVIFSRNVLGLPRHVSFWYIALNCTCYSMIMLLLVFHFLYRYLAVCKPNMSKLFSFPYV 130
Query: 289 SLVFLISV 312
+++ LI V
Sbjct: 131 TILILIFV 138
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.82
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGAPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.82
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.82
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.82
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 1345 PPXPFXXXXGXPGXXFXXGXXXXSRXGPXGXXGFXPPPXGG 1223
PP P G PG SR GP G G PPP G
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXP 1166
PPP PS+ P GG P P G PP P P P P
Sbjct: 317 PPPPPPSRFGPPGM-GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 995 GGXPXGPAPXXXIKKXXPXXXGGEPQXDXKXPGXXPXXPPGXPPVP 1132
GG P P P P P+ PG P PP PP P
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPP--PPRYPSAGPGMYPPPPPSRPPAP 374
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.82
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 1345 PPXPFXXXXGXPGXXFXXGXXXXSRXGPXGXXGFXPPPXGG 1223
PP P G PG SR GP G G PPP G
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXP 1166
PPP PS+ P GG P P G PP P P P P
Sbjct: 327 PPPPPPSRFGPPGM-GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 995 GGXPXGPAPXXXIKKXXPXXXGGEPQXDXKXPGXXPXXPPGXPPVP 1132
GG P P P P P+ PG P PP PP P
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPP--PPRYPSAGPGMYPPPPPSRPPAP 384
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.82
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.82
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P G G
Sbjct: 111 PGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGN 170
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G NP P P + P I PG P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAP 218
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 713 PFXVXGXGGGGGGFXGXNXXAXXXGRGG 796
PF G GGGGGGF G N G G
Sbjct: 874 PFGGGGFGGGGGGFGGGNRGNGFGGGSG 901
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein 20
protein.
Length = 288
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 1101 PGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNPXXPXGPXREX 1280
P PPG P P P G GG P G GG NP P G R
Sbjct: 157 PKGPPGPPGGH------GEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTP-GQVRSL 209
Query: 1281 XXXPXXXIXPGXP 1319
P PG P
Sbjct: 210 PSPPGEPGQPGEP 222
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.1 bits (67), Expect = 1.9
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Frame = -1
Query: 1318 GXPGXXFXXGXXXXSRXGPXGXXGFXPPPXGGXPPXXXXXRXGXXXPPXPXGK-GXXXXX 1142
G PG SR GP G G PP P G PP P G+ G
Sbjct: 239 GQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYG-VGPPGPPGPSGRPGAPGQP 297
Query: 1141 TXGXXXGXPG--GXPG 1100
G PG G PG
Sbjct: 298 GPDGQPGAPGNDGTPG 313
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P+ P G P G PP G PPG P P P P G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 265
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 266 PPSGGPP-GPFDPSGAPPSGGPPGPFDPSG 294
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 355
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 356 PPSGGPP-GPFDPSGAPPSGGPPGPFDPSG 384
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 386 PPSGGPP-GPFDPSGAPPSGGPPGPFNPSG 414
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 446 PPSGGPP-GPFNPSGAPPSGGPPGPFNPSG 474
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 461 PPSGGPP-GPFNPSGAPPSGGPPGPFDPSG 489
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 476 PPSGGPP-GPFDPSGAPPSGGPPGPFNPSG 504
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 490
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 491 PPSGGPP-GPFNPSGAPPSGGPPGPFDPSG 519
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 251 PPSGGPP-GPFNPSGAPPSGGPPGPFDPSG 279
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 280
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 281 PPSGGPP-GPFDPSGAPPSGGPPGPFDPSG 309
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 310
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 311 QPSGGPP-GPFNPSGAPPSGGPPGPFDPSG 339
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 400
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 401 PPSGGPP-GPFNPSGAPPSGGPPGPFNPSG 429
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 416 PPSGGPP-GPFNPSGAPPSGGPPGPFNPSG 444
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 431 PPSGGPP-GPFNPSGAPPSGGPPGPFNPSG 459
Score = 29.1 bits (62), Expect = 7.6
Identities = 27/90 (30%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXX--GGNPXGTXKXXXXPP-GXPPGX--PXXXPXVXXXXXPX-PXGX 1175
PP P P G P G PP G PPG P P P P G
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGA 220
Query: 1176 GGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
P G PP GG P P G
Sbjct: 221 PPSGGPP-GPFNPSGAPPSGGPPGPFDPSG 249
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 3.3
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P P+ P GNP P PPG P P GG P
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG-----PAGPAGNDGAPGAPGGPGEP 209
Query: 1194 XRXXXXXGGXPPXGGGXNPXXPXG 1265
G P G P P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 3.3
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P P+ P GNP P PPG P P GG P
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG-----PAGPAGNDGAPGAPGGPGEP 209
Query: 1194 XRXXXXXGGXPPXGGGXNPXXPXG 1265
G P G P P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXG--GNPXGTXKXXXXP-PGXPPGXPXXXPXVXXXXXPXPXGXGGLX 1187
PP P P G G P GT P P PPG P P P G G
Sbjct: 159 PPGPPGAPGDPGEAGTPGRP-GTDATPGLPGPRGPPGPPGEA------GQPGPQGDAGT- 210
Query: 1188 XPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P + G P G P P GP
Sbjct: 211 -PAQSEPLTPGAPGEAGDAGPAGPPGP 236
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 3.3
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P P+ P GNP P PPG P P GG P
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG-----PAGPAGNDGAPGAPGGPGEP 209
Query: 1194 XRXXXXXGGXPPXGGGXNPXXPXG 1265
G P G P P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 3.3
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +3
Query: 1014 PPPXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P P+ P GNP P PPG P P GG P
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG-----PAGPAGNDGAPGAPGGPGEP 209
Query: 1194 XRXXXXXGGXPPXGGGXNPXXPXG 1265
G P G P P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Frame = +3
Query: 1017 PPXXPSKXXXPXXXG--GNPXGTXKXXXXP-PGXPPGXPXXXPXVXXXXXPXPXGXGGLX 1187
PP P P G G P GT P P PPG P P P G G
Sbjct: 159 PPGPPGAPGDPGEAGTPGRP-GTDATPGLPGPRGPPGPPGEA------GQPGPQGDAGT- 210
Query: 1188 XPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P + G P G P P GP
Sbjct: 211 -PAQSEPLTPGAPGEAGDAGPAGPPGP 236
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.4
Identities = 30/116 (25%), Positives = 31/116 (26%), Gaps = 2/116 (1%)
Frame = +3
Query: 927 TPGKNXXPXGXXRARNXXKGXWXGVXQXXPPPXXPSKXXXPXXXGGNPXGTXKXXXXP-P 1103
TPGK P + KG PPP P P G P GT P P
Sbjct: 133 TPGKPGAPGNPGAS---GKGAAAPCEPSTPPPCQPCPAGPPGPPG--PDGTPGEPGGPGP 187
Query: 1104 GXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXG-GGXNPXXPXGP 1268
P P P G G G G G P P GP
Sbjct: 188 AGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGP 243
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXGXXXXQXG 892
G GGG GGF G G G G F +++ GG G + G
Sbjct: 65 GFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQG 119
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/112 (24%), Positives = 31/112 (27%), Gaps = 1/112 (0%)
Frame = +3
Query: 933 GKNXXPXGXXRARNXXKGXWXGVXQXXPP-PXXPSKXXXPXXXGGNPXGTXKXXXXPPGX 1109
G++ P +A + G PP P P P G P PP
Sbjct: 155 GQDGQPGQAGQADSGSSGQACITCPAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPG 214
Query: 1110 PPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNPXXPXG 1265
PPG P P G G P G P G P P G
Sbjct: 215 PPGPPGPPGNDGQPGAPGQDGQPG--APGTNTVNSPGGPGPAGPPGPPGPPG 264
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/106 (24%), Positives = 28/106 (26%), Gaps = 6/106 (5%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXGGNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGG------ 1181
P P K P G NP + P PP P P P G G
Sbjct: 119 PGRPGKAGAPGLPG-NPGRPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPG 177
Query: 1182 LXXPXRXXXXXGGXPPXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G P G NP P P + I PG P
Sbjct: 178 APGSDGQPGAAGDKGPAGPNGNPGAPGSPGKPGEDGKSEPITPGAP 223
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 737 GGGGGFXGXNXXAXXXGRGGXXMGXXSXF 823
GGGGGF G + GRGG G F
Sbjct: 180 GGGGGFRGGDRGGFGGGRGGFRGGDRGGF 208
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 728 GXGGGGGGFXGXNXXAXXXGRGGXXMG 808
G GGG GGF G + GRGG G
Sbjct: 192 GFGGGRGGFRGGDRGGFRGGRGGDFGG 218
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 1098 PPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGG-GXNPXXP 1259
PP P G P P P P GG+ P PP G G P P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +2
Query: 716 FXVXGXGGGGGGFXGXNXXAXXXGRGGXXMGXXSXF 823
F G GGGGGGF G G GG G S F
Sbjct: 477 FGSFGGGGGGGGFGG---GGGGFGGGGGGFGSGSPF 509
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 1101 PGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P PPG P P G GG P G P GG P P GP
Sbjct: 164 PRGPPGGMGGPPG--HGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 1101 PGXPPGXPXXXPXVXXXXXPXPXGXGGLXXPXRXXXXXGGXPPXGGGXNPXXPXGP 1268
P PPG P P G GG P G P GG P P GP
Sbjct: 444 PRGPPGGMGGPPG--HGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.6
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +2
Query: 728 GXGGGGGGFXGXN--XXAXXXGRGGXXMGXXSXFXAHELXXXGRPXGGXGXXXXQXGXIX 901
G GGGGGGF G N G GG G L G G G G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGG 117
Query: 902 GXPXKXGD 925
G D
Sbjct: 118 GGGFNFND 125
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen protein
112 protein.
Length = 297
Score = 29.1 bits (62), Expect = 7.6
Identities = 27/108 (25%), Positives = 30/108 (27%), Gaps = 8/108 (7%)
Frame = +3
Query: 1020 PXXPSKXXXPXXXG--GNPXGTXKXXXXPPGXPPGXPXXXPXVXXXXXPXPXGXGGLXXP 1193
P P + P G GNP + P PP P P P G GL
Sbjct: 109 PGKPGRPGKPGVAGLPGNPGRPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQ 168
Query: 1194 XRXXXXXG--GXP----PXGGGXNPXXPXGPXREXXXXPXXXIXPGXP 1319
G G P P G P P P + PG P
Sbjct: 169 PGGPGQDGQPGQPGPKGPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,033,161
Number of Sequences: 27780
Number of extensions: 459028
Number of successful extensions: 1910
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3840064182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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