Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G08
         (1417 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           32   0.95 
07_03_1107 - 24024387-24024497,24025799-24026410                       29   8.9  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 23/78 (29%), Positives = 24/78 (30%)
 Frame = -3

Query: 926 PXXPXXXXXFPXYPPXLXKTXXPPLXGXXPLXPTXXPGXXVXXRGNXXXPQKXTPXPRGV 747
           P  P      P   P    T  PP     PL P   P   V    +   P    P P   
Sbjct: 39  PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVT---SSPPPPPLPPPPPPP 95

Query: 746 AEXXXPXKPXXPPPXPGK 693
           A    P  P  PPP P K
Sbjct: 96  AASPPPPPPSPPPPSPVK 113


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -3

Query: 779 PQKXTPXPRGVAEXXXPXKPXXPPPXPGKKK 687
           P    P P   A    P KP  P P P KKK
Sbjct: 117 PVASPPSPAAEAPATIPTKPDAPAPAPAKKK 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,126,169
Number of Sequences: 37544
Number of extensions: 368921
Number of successful extensions: 752
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4478413688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)