Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G07
(1365 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 128 6e-29
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 128 6e-29
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 128 6e-29
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 128 6e-29
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 128 6e-29
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 128 6e-29
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 124 8e-28
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 97 1e-19
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 75 6e-13
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 73 2e-12
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 73 2e-12
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 4e-11
AF268617-1|AAG53084.1| 186|Homo sapiens POU 5 domain protein pr... 33 3.2
Z11901-1|CAA77953.1| 359|Homo sapiens octamer binding protein 3... 32 4.2
Z11898-1|CAA77951.1| 360|Homo sapiens octamer binding protein 3... 32 4.2
DQ486513-1|ABF29403.1| 359|Homo sapiens POU domain transcriptio... 32 4.2
DQ120688-1|ABB92462.1| 359|Homo sapiens rcPOU5F1 protein. 32 4.2
BX088580-3|CAI18709.1| 360|Homo sapiens POU domain class 5 tran... 32 4.2
BC117437-1|AAI17438.1| 360|Homo sapiens POU class 5 homeobox 1 ... 32 4.2
BC117435-1|AAI17436.1| 360|Homo sapiens POU class 5 homeobox 1 ... 32 4.2
AL773544-9|CAI18486.1| 360|Homo sapiens POU domain, class 5, tr... 32 4.2
AL662844-17|CAI18331.1| 360|Homo sapiens POU domain, class 5, t... 32 4.2
AL662833-12|CAI17408.1| 360|Homo sapiens POU domain, class 5, t... 32 4.2
AF268618-1|AAG53085.1| 359|Homo sapiens POU 5 domain protein pr... 32 4.2
AF268615-1|AAG53083.1| 359|Homo sapiens POU 5 domain protein pr... 32 4.2
AF268613-1|AAG53082.1| 286|Homo sapiens POU 5 domain protein pr... 32 4.2
AB202105-2|BAE78630.1| 360|Homo sapiens POU domain, class 5, tr... 32 4.2
AB103619-2|BAF31281.1| 360|Homo sapiens OTF3 protein protein. 32 4.2
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 128 bits (308), Expect = 6e-29
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAKNY 336
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 124 bits (299), Expect = 8e-28
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RMGESDDCIVRLTKKDGILAK 330
RMGESDD I+RL K DGI++K
Sbjct: 61 RMGESDDSILRLAKADGIVSK 81
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 97.5 bits (232), Expect = 1e-19
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 267
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 268 RM 273
RM
Sbjct: 61 RM 62
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 74.9 bits (176), Expect = 6e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 148 NRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 309
NR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIRRMGESDD I+RL K
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 73.3 bits (172), Expect = 2e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 222
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 73.3 bits (172), Expect = 2e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 222
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 68.9 bits (161), Expect = 4e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 88 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 198
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>AF268617-1|AAG53084.1| 186|Homo sapiens POU 5 domain protein
protein.
Length = 186
Score = 32.7 bits (71), Expect = 3.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEEWGIPPCPPPYEFCGGMAYCGP 78
>Z11901-1|CAA77953.1| 359|Homo sapiens octamer binding protein 3_like
sequence protein.
Length = 359
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYELCGGMAYCGP 78
>Z11898-1|CAA77951.1| 360|Homo sapiens octamer binding protein 3A
protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>DQ486513-1|ABF29403.1| 359|Homo sapiens POU domain transcription
factor Oct-4 protein.
Length = 359
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYELCGGMAYCGP 78
>DQ120688-1|ABB92462.1| 359|Homo sapiens rcPOU5F1 protein.
Length = 359
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYELCGGMAYCGP 78
>BX088580-3|CAI18709.1| 360|Homo sapiens POU domain class 5
transcription factor 1 protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>BC117437-1|AAI17438.1| 360|Homo sapiens POU class 5 homeobox 1
protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>BC117435-1|AAI17436.1| 360|Homo sapiens POU class 5 homeobox 1
protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>AL773544-9|CAI18486.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>AL662844-17|CAI18331.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>AL662833-12|CAI17408.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>AF268618-1|AAG53085.1| 359|Homo sapiens POU 5 domain protein
protein.
Length = 359
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYELCGGMAYCGP 78
>AF268615-1|AAG53083.1| 359|Homo sapiens POU 5 domain protein
protein.
Length = 359
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYELCGGMAYCGP 78
>AF268613-1|AAG53082.1| 286|Homo sapiens POU 5 domain protein
protein.
Length = 286
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 1007 GVSPWKXPPCPPLFRXCXXXXTCPP 1081
G W PPCPPL+ C C P
Sbjct: 47 GSEVWGIPPCPPLYEFCGGMAYCGP 71
>AB202105-2|BAE78630.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
>AB103619-2|BAF31281.1| 360|Homo sapiens OTF3 protein protein.
Length = 360
Score = 32.3 bits (70), Expect = 4.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 1004 PGVSPWKXPPCPPLFRXCXXXXTCPP 1081
PG W PPCPP + C C P
Sbjct: 53 PGSEVWGIPPCPPPYEFCGGMAYCGP 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,399,090
Number of Sequences: 237096
Number of extensions: 2021611
Number of successful extensions: 3097
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3097
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19786097374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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