Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G04
         (1341 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...   368   e-103
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...   111   3e-26
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    27   1.2  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score =  368 bits (905), Expect = e-103
 Identities = 167/240 (69%), Positives = 190/240 (79%)
 Frame = +3

Query: 426  KHTVHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKWRFLLQCLEDL 605
            KHTVHWFRKGLR+HDNPALREG+  A TFRCVFIIDPWFA SSNVGINKWRFLLQCL+DL
Sbjct: 4    KHTVHWFRKGLRLHDNPALREGLRGARTFRCVFIIDPWFAGSSNVGINKWRFLLQCLDDL 63

Query: 606  DKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIISKCREVGI 785
            D++L+KLNSRLFV+RGQPADALPKLF+EWGTT LTFEEDPEP+GRVRDHNI   C+E+GI
Sbjct: 64   DRNLRKLNSRLFVIRGQPADALPKLFKEWGTTCLTFEEDPEPFGRVRDHNISEMCKELGI 123

Query: 786  TVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNGATTXI 965
             V S  SHTLY L++IIE+NGG+APLTYHQFQA+IASM      E  IT  ++  A T  
Sbjct: 124  EVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASMDAPPQPEAAITLDVIGNANTPQ 183

Query: 966  TDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREAXXXXXXX*REKPGGXSXGXPKMTPQ 1145
             D+HDD+ GVPTL+ELG  TE L+PP+WIGGE EA          K    S G PKMTPQ
Sbjct: 184  YDDHDDKYGVPTLEELGFETEALRPPVWIGGETEALARLERHLERKAWVASFGRPKMTPQ 243


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score =  111 bits (268), Expect = 3e-26
 Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
 Frame = +3

Query: 429 HTVHWFRKGLRIHDNPALREGI--------IDAVTFRCVFIIDPWFASSSNVGINKWRFL 584
           + + WFR GLR+HDNP+L E +         +AV    +FI D   A +  VG N+ +FL
Sbjct: 4   NNILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYNRMKFL 63

Query: 585 LQCLEDLDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIIS 764
           L+ L DLD+  + L  +L V RG     L +LF E     L +E+D EP  + RD  +  
Sbjct: 64  LESLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDCEPIWKERDDAVAK 123

Query: 765 KCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQF 878
            CR + +     VSHTL+   ++I+ NG   PLTY  F
Sbjct: 124 LCRTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQMF 161


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 15  IGNPLDSRXXXSCLTRDCVVVIYSKCSRRCS 107
           + NPLD R    C+   C V    KCSR  S
Sbjct: 21  LANPLDRRNFGVCVWMLCEVCCSRKCSRNGS 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,176,644
Number of Sequences: 2352
Number of extensions: 22696
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154023705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)