Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G04
(1341 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptoc... 286 1e-76
D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein. 286 1e-76
D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein. 286 1e-76
BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1 (photoly... 286 1e-76
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 277 5e-74
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 277 5e-74
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 277 5e-74
BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein. 105 5e-22
AJ012793-1|CAB42642.1| 576|Homo sapiens lymphocyte adaptor prot... 34 1.3
AF055581-1|AAC71695.1| 575|Homo sapiens adaptor protein Lnk pro... 34 1.3
BX538095-1|CAD98013.1| 1287|Homo sapiens hypothetical protein pr... 31 7.2
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 31 7.2
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 31 7.2
>EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptochrome
1 protein.
Length = 586
Score = 286 bits (701), Expect = 1e-76
Identities = 129/216 (59%), Positives = 160/216 (74%)
Frame = +3
Query: 423 GKHTVHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKWRFLLQCLED 602
G + VHWFRKGLR+HDNPAL+E I A T RCV+I+DPWFA SSNVGIN+WRFLLQCLED
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLED 61
Query: 603 LDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIISKCREVG 782
LD +L+KLNSRLFV+RGQPAD P+LF+EW T L+ E D EP+G+ RD I E G
Sbjct: 62 LDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAG 121
Query: 783 ITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNGATTX 962
+ V R+SHTLY LDKIIE NGG+ PLTY +FQ LI+ M TIT +++ TT
Sbjct: 122 VEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTP 181
Query: 963 ITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
++D+HD++ GVP+L+ELG T+GL +W GGE EA
Sbjct: 182 LSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA 217
>D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein.
Length = 586
Score = 286 bits (701), Expect = 1e-76
Identities = 129/216 (59%), Positives = 160/216 (74%)
Frame = +3
Query: 423 GKHTVHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKWRFLLQCLED 602
G + VHWFRKGLR+HDNPAL+E I A T RCV+I+DPWFA SSNVGIN+WRFLLQCLED
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLED 61
Query: 603 LDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIISKCREVG 782
LD +L+KLNSRLFV+RGQPAD P+LF+EW T L+ E D EP+G+ RD I E G
Sbjct: 62 LDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAG 121
Query: 783 ITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNGATTX 962
+ V R+SHTLY LDKIIE NGG+ PLTY +FQ LI+ M TIT +++ TT
Sbjct: 122 VEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTP 181
Query: 963 ITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
++D+HD++ GVP+L+ELG T+GL +W GGE EA
Sbjct: 182 LSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA 217
>D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein.
Length = 586
Score = 286 bits (701), Expect = 1e-76
Identities = 129/216 (59%), Positives = 160/216 (74%)
Frame = +3
Query: 423 GKHTVHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKWRFLLQCLED 602
G + VHWFRKGLR+HDNPAL+E I A T RCV+I+DPWFA SSNVGIN+WRFLLQCLED
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLED 61
Query: 603 LDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIISKCREVG 782
LD +L+KLNSRLFV+RGQPAD P+LF+EW T L+ E D EP+G+ RD I E G
Sbjct: 62 LDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAG 121
Query: 783 ITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNGATTX 962
+ V R+SHTLY LDKIIE NGG+ PLTY +FQ LI+ M TIT +++ TT
Sbjct: 122 VEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTP 181
Query: 963 ITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
++D+HD++ GVP+L+ELG T+GL +W GGE EA
Sbjct: 182 LSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA 217
>BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1
(photolyase-like) protein.
Length = 586
Score = 286 bits (701), Expect = 1e-76
Identities = 129/216 (59%), Positives = 160/216 (74%)
Frame = +3
Query: 423 GKHTVHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKWRFLLQCLED 602
G + VHWFRKGLR+HDNPAL+E I A T RCV+I+DPWFA SSNVGIN+WRFLLQCLED
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLED 61
Query: 603 LDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHNIISKCREVG 782
LD +L+KLNSRLFV+RGQPAD P+LF+EW T L+ E D EP+G+ RD I E G
Sbjct: 62 LDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAG 121
Query: 783 ITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNGATTX 962
+ V R+SHTLY LDKIIE NGG+ PLTY +FQ LI+ M TIT +++ TT
Sbjct: 122 VEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTP 181
Query: 963 ITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
++D+HD++ GVP+L+ELG T+GL +W GGE EA
Sbjct: 182 LSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA 217
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptochrome
2 protein.
Length = 593
Score = 277 bits (680), Expect = 5e-74
Identities = 130/225 (57%), Positives = 158/225 (70%), Gaps = 3/225 (1%)
Frame = +3
Query: 405 APRRTPGKHT---VHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKW 575
AP PG + VHWFRKGLR+HDNPAL + A RCV+I+DPWFA+SS+VGIN+W
Sbjct: 12 APAPAPGTDSASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINRW 71
Query: 576 RFLLQCLEDLDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHN 755
RFLLQ LEDLD SL+KLNSRLFVVRGQPAD P+LF+EWG T LTFE D EP+G+ RD
Sbjct: 72 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA 131
Query: 756 IISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITP 935
I+ +E G+ V + SHTLY LD+IIE NG K PLTY +FQA+I+ M +T
Sbjct: 132 IMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTS 191
Query: 936 QMLNGATTXITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
Q + I +NHD+ GVP+L+ELG TEGL P +W GGE EA
Sbjct: 192 QQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEA 236
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 277 bits (680), Expect = 5e-74
Identities = 130/225 (57%), Positives = 158/225 (70%), Gaps = 3/225 (1%)
Frame = +3
Query: 405 APRRTPGKHT---VHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKW 575
AP PG + VHWFRKGLR+HDNPAL + A RCV+I+DPWFA+SS+VGIN+W
Sbjct: 12 APAPAPGTDSASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINRW 71
Query: 576 RFLLQCLEDLDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHN 755
RFLLQ LEDLD SL+KLNSRLFVVRGQPAD P+LF+EWG T LTFE D EP+G+ RD
Sbjct: 72 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA 131
Query: 756 IISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITP 935
I+ +E G+ V + SHTLY LD+IIE NG K PLTY +FQA+I+ M +T
Sbjct: 132 IMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTS 191
Query: 936 QMLNGATTXITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
Q + I +NHD+ GVP+L+ELG TEGL P +W GGE EA
Sbjct: 192 QQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEA 236
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 277 bits (680), Expect = 5e-74
Identities = 130/225 (57%), Positives = 158/225 (70%), Gaps = 3/225 (1%)
Frame = +3
Query: 405 APRRTPGKHT---VHWFRKGLRIHDNPALREGIIDAVTFRCVFIIDPWFASSSNVGINKW 575
AP PG + VHWFRKGLR+HDNPAL + A RCV+I+DPWFA+SS+VGIN+W
Sbjct: 8 APAPAPGTDSASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINRW 67
Query: 576 RFLLQCLEDLDKSLKKLNSRLFVVRGQPADALPKLFREWGTTALTFEEDPEPYGRVRDHN 755
RFLLQ LEDLD SL+KLNSRLFVVRGQPAD P+LF+EWG T LTFE D EP+G+ RD
Sbjct: 68 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA 127
Query: 756 IISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITP 935
I+ +E G+ V + SHTLY LD+IIE NG K PLTY +FQA+I+ M +T
Sbjct: 128 IMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTS 187
Query: 936 QMLNGATTXITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
Q + I +NHD+ GVP+L+ELG TEGL P +W GGE EA
Sbjct: 188 QQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEA 232
>BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein.
Length = 461
Score = 105 bits (251), Expect = 5e-22
Identities = 49/100 (49%), Positives = 63/100 (63%)
Frame = +3
Query: 771 REVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMXXXXXAEVTITPQMLNG 950
+E G+ V + SHTLY LD+IIE NG K PLTY +FQA+I+ M +T Q +
Sbjct: 5 KEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMES 64
Query: 951 ATTXITDNHDDRXGVPTLKELGXXTEGLKPPIWIGGEREA 1070
I +NHD+ GVP+L+ELG TEGL P +W GGE EA
Sbjct: 65 CRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEA 104
>AJ012793-1|CAB42642.1| 576|Homo sapiens lymphocyte adaptor protein
(Lnk) protein.
Length = 576
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 327 KMSAAPETLPPPSAQAHTPARPTHMSAPRRTPGKHTVHWFRKGLR 461
K A+PE P P+A AR + AP R PG + FR+ LR
Sbjct: 99 KAEASPEPGPGPAAPGLPKARSSEELAPPRPPGPCSFQHFRRSLR 143
>AF055581-1|AAC71695.1| 575|Homo sapiens adaptor protein Lnk
protein.
Length = 575
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 327 KMSAAPETLPPPSAQAHTPARPTHMSAPRRTPGKHTVHWFRKGLR 461
K A+PE P P+A AR + AP R PG + FR+ LR
Sbjct: 99 KAEASPEPGPGPAAPGLPKARSSEELAPPRPPGPCSFQHFRRSLR 143
>BX538095-1|CAD98013.1| 1287|Homo sapiens hypothetical protein
protein.
Length = 1287
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 498 DAVTFRCVFIIDPWFASSSNVG--INKWRFLLQCLEDLDKSLKKLNSRLFVVRGQPADAL 671
++V R ++D W + I +++ ++ + +K +K+L SRL V++ Q D L
Sbjct: 166 ESVGRRISQLLDSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSEDPL 225
Query: 672 PKLFRE 689
P+L +
Sbjct: 226 PELHED 231
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 342 PETLPPPSAQAHTPARPTHMSAPRRTP 422
P T PPP AQ PA P S P P
Sbjct: 62 PRTTPPPGAQCEVPASPQRPSRPGALP 88
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 342 PETLPPPSAQAHTPARPTHMSAPRRTP 422
P T PPP AQ PA P S P P
Sbjct: 62 PRTTPPPGAQCEVPASPQRPSRPGALP 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,083,796
Number of Sequences: 237096
Number of extensions: 3371694
Number of successful extensions: 9135
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9097
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19347624302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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