Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G04
(1341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 32 1.1
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 32 1.1
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 31 1.8
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 30 4.3
U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical p... 30 4.3
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 30 4.3
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 30 4.3
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 327 KMSAAPETLPPPSAQA-HTPARPTHMSAPRRTPGKHTVHWFRK 452
+M AP TLPPPSA++ H P P ++ R ++T + K
Sbjct: 160 QMVTAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSK 202
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 327 KMSAAPETLPPPSAQA-HTPARPTHMSAPRRTPGKHTVHWFRK 452
+M AP TLPPPSA++ H P P ++ R ++T + K
Sbjct: 162 QMVTAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSK 204
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 327 KMSAAPETLPPPSAQAHTPARPTHMSAPRRTP 422
K+ A+ + PP + A P RP+ APRR P
Sbjct: 215 KIGASSTSAPPKTTAAGAPKRPSSAVAPRRAP 246
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 264 GYELRSSVLFELGCK*ELIETKMSAAPETLPPPSAQAHTPARPTHMSAPRR 416
G+E+RS E G K + +AP+ +P P AQ + P P + SA ++
Sbjct: 174 GHEVRSQAC-EYGRKIQRRGCPARSAPQRVPAPPAQQYAPRAPEYPSAQQQ 223
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 332 VSSPRNTATTKCSSSHAGQAYSYVRTS 412
VSS NTATT SSS+ Q ++ RTS
Sbjct: 14 VSSSSNTATTSTSSSNTSQKWATSRTS 40
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 332 VSSPRNTATTKCSSSHAGQAYSYVRTS 412
VSS NTATT SSS+ Q ++ RTS
Sbjct: 14 VSSSSNTATTSTSSSNTSQKWATSRTS 40
>U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical
protein C37C3.2b protein.
Length = 402
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 717 EDPEPYGRVRDHNIISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIAS 896
E+PE VR +NI SKC+ G + + H KL I +N K + + + +
Sbjct: 103 ENPETQLFVRKNNIKSKCKACGCSFDIDLKH---KLSTFIMKNPPKIDVDFSKAEQKNGK 159
Query: 897 MXXXXXAEVTITPQMLNGATTXITDNHDD 983
A + +++ + +++ DD
Sbjct: 160 KTSGADAAAAVAADIIHNSDKGSSNDDDD 188
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 717 EDPEPYGRVRDHNIISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIAS 896
E+PE VR +NI SKC+ G + + H KL I +N K + + + +
Sbjct: 103 ENPETQLFVRKNNIKSKCKACGCSFDIDLKH---KLSTFIMKNPPKIDVDFSKAEQKNGK 159
Query: 897 MXXXXXAEVTITPQMLNGATTXITDNHDD 983
A + +++ + +++ DD
Sbjct: 160 KTSGADAAAAVAADIIHNSDKGSSNDDDD 188
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 717 EDPEPYGRVRDHNIISKCREVGITVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIAS 896
E+PE VR +NI SKC+ G + + H KL I +N K + + + +
Sbjct: 103 ENPETQLFVRKNNIKSKCKACGCSFDIDLKH---KLSTFIMKNPPKIDVDFSKAEQKNGK 159
Query: 897 MXXXXXAEVTITPQMLNGATTXITDNHDD 983
A + +++ + +++ DD
Sbjct: 160 KTSGADAAAAVAADIIHNSDKGSSNDDDD 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,497,235
Number of Sequences: 27780
Number of extensions: 509565
Number of successful extensions: 1514
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3767217436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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