Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G03
         (1261 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           29   0.29 
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           29   0.38 
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           29   0.38 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   8.1  

>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 29.1 bits (62), Expect = 0.29
 Identities = 9/35 (25%), Positives = 24/35 (68%)
 Frame = -1

Query: 961 QIIKYVHSIMRYLEWIIPILKVKVKNTRRSFMRGL 857
           +++ +  S+++ L W++P+ +++V N R + +R L
Sbjct: 161 EVLYFKDSMVQQLNWLVPLQRLRVLNLRGNILRML 195


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 0.38
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
 Frame = +2

Query: 491 KSQTSTLNGKTSKTKQLQRVANNA-----IDAVQKHFTKDPPKQVATRAQNGILKNFERK 655
           + + + L+G+ S+T++L+    N      IDA+++ + +    QV  R Q  I    E+K
Sbjct: 334 RKEHALLSGQGSETERLECERENQARQREIDALKEQY-RTVIDQVTLRKQAKI--TLEQK 390

Query: 656 DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTS 835
            K  ++ +SNG    A  D + + ++    L+N +  +   +  + I ++  ++ ++  S
Sbjct: 391 KKALDEQVSNGRRAHAELDGTLKQAVGQIELQNATEEQSPLQLLRAIVKRYEEMYVEQQS 450


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 0.38
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
 Frame = +2

Query: 491 KSQTSTLNGKTSKTKQLQRVANNA-----IDAVQKHFTKDPPKQVATRAQNGILKNFERK 655
           + + + L+G+ S+T++L+    N      IDA+++ + +    QV  R Q  I    E+K
Sbjct: 334 RKEHALLSGQGSETERLECERENQARQREIDALKEQY-RTVIDQVTLRKQAKI--TLEQK 390

Query: 656 DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTS 835
            K  ++ +SNG    A  D + + ++    L+N +  +   +  + I ++  ++ ++  S
Sbjct: 391 KKALDEQVSNGRRAHAELDGTLKQAVGQIELQNATEEQSPLQLLRAIVKRYEEMYVEQQS 450


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 465  LVSTVTFFTGMALSLS 418
            + S+V FF GM LSLS
Sbjct: 2791 MASSVAFFVGMGLSLS 2806


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,128,317
Number of Sequences: 2352
Number of extensions: 22240
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144287691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)