Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G02
         (1233 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    29   0.054
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.29 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   6.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 29.5 bits (63), Expect = 0.054
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 540 FVPVFSSFLILFCQNPPFC 596
           F+PV+ S+L++F Q  PFC
Sbjct: 173 FLPVYVSYLLIFVQQIPFC 191


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.29
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 719 IEIMEPFKLLIAENFSFTVKIYLHRLPSNYLKSRIFHSIKFTELFFFSSVF*IFN 883
           +E+   F LLI  N    + +  +R   N++      ++KF  LF  S     FN
Sbjct: 155 VEVYPLFVLLIVSNVVLKILVEKYRHQKNFINESNVETVKF-NLFLLSQAVETFN 208


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -3

Query: 442 NQRH*YFDHFQLIYIFCHYL 383
           ++R+ Y    QL+++FC+++
Sbjct: 132 SERNDYVSLLQLVFVFCYFI 151


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 191 LFETQFCLHYITTLIKLYYF 250
           +FE+ F LH  TTL  +YYF
Sbjct: 304 VFES-FYLHKATTLETVYYF 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,716
Number of Sequences: 336
Number of extensions: 4779
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)