Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G02
         (1233 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181...    32   0.81 

>09_06_0230 + 21717225-21717301,21717888-21717972,21718045-21718165,
            21718244-21718368,21718940-21718984,21719082-21719345,
            21720067-21720111,21720182-21720212,21721644-21721693,
            21722433-21724310,21724406-21724564,21724821-21724939,
            21726917-21727059,21727670-21727735,21728184-21728317,
            21728454-21728591,21728927-21729186,21729295-21729406,
            21730727-21730909
          Length = 1344

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
 Frame = -1

Query: 801  EGSRCRYIFTVKLKFSAIKSLKGSIISIT---NNYLGTNF*YSRLKLFASQKTLLNKNFF 631
            +G R  Y F    K  ++ +L G++ +I        GT+  +  L    SQKT  NKN +
Sbjct: 1112 KGLRPAYSFINAAKRDSVDNLSGALDAIAWGKEPCAGTSGPFKVLYSGKSQKTKQNKNIY 1171

Query: 630  FKLQSP-LLFLERKMVDFDKRESKMKKKQEQKCFAS 526
              L +P +  LE+  +D  K+ ++   KQ +  F+S
Sbjct: 1172 DFLHNPEVQALEKNFMDTYKQRTEKPSKQ-RSAFSS 1206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,199,297
Number of Sequences: 37544
Number of extensions: 364183
Number of successful extensions: 533
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)