Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_G02
         (1233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   4.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   5.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   5.5  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    23   5.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   5.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 93  YFNWPFFYFYYTVQNKKSYFRHCVQLNQSYIAFYLKHNF 209
           Y  W +    Y ++NK +YF   + LN  Y  F+L+  F
Sbjct: 205 YSGW-YLNHDYNLENKLNYFIEDIGLNTYY--FFLRQAF 240


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 555 SSFLILFCQNPP 590
           S+FL++FC +PP
Sbjct: 97  SNFLMMFCMSPP 108


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 102 WPFFYFYYTVQNKKSY 149
           W ++Y Y+T+  ++SY
Sbjct: 172 WDYYYIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 102 WPFFYFYYTVQNKKSY 149
           W ++Y Y+T+  ++SY
Sbjct: 187 WDYYYIYHTLVAEQSY 202


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 555 SSFLILFCQNPP 590
           S FL++FC +PP
Sbjct: 63  SDFLMMFCMSPP 74


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 102 WPFFYFYYTVQNKKSY 149
           W ++Y Y+T+  ++SY
Sbjct: 75  WDYYYIYHTLVAEQSY 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,359
Number of Sequences: 438
Number of extensions: 5068
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)