Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G01
(1222 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1249 - 35714645-35716003,35716700-35716761,35717007-357171... 39 0.009
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 33 0.46
03_05_0874 - 28429982-28430083,28430284-28430472,28430585-284306... 31 1.4
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.8
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 30 3.2
02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004 30 3.2
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 29 7.4
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623... 29 7.4
04_04_0145 + 23103397-23104308 29 9.8
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 29 9.8
>01_06_1249 -
35714645-35716003,35716700-35716761,35717007-35717181,
35717276-35717301,35717917-35717983,35719803-35719945,
35720337-35720349
Length = 614
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +1
Query: 799 QVEMLQDQKKSQRDSLIA-ELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSL 963
Q+ LQD+ K ++ L++ E ++RAL+ +A+D +AQA A+ V++SE +L L
Sbjct: 176 QLSQLQDELKKAKEQLLSTEHSKRRALQ--EAEDARAQAAAASAQVRDSEAQLAEL 229
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/105 (23%), Positives = 43/105 (40%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXX 738
++ +E D V+ L S K L++ EE K ++ L+Q +
Sbjct: 575 EVERVSDEKQVAADLVRKLSSDKKGLIDEKRSFIEENKKLHAHIKILEQSVADHQEVSRE 634
Query: 739 XXXXXXXXXXXXDAIIKENKQVEMLQDQKKSQRDSLIAELERKRA 873
A KENKQ+E+ + ++ + SL+ ELE R+
Sbjct: 635 RAISADKLKEQLAASEKENKQLELARLNQEEKNSSLLKELEDCRS 679
>03_05_0874 -
28429982-28430083,28430284-28430472,28430585-28430655,
28430754-28431021,28432579-28432818,28433791-28433979
Length = 352
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 796 KQVEMLQDQKK--SQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLR 966
K E L DQKK S+ +S + L+ L +IK++ K ++VQE EEKL LR
Sbjct: 215 KLQEELADQKKAISEVESEVRGLQSNLTLA-----EIKSKEAKLQREVQEMEEKLNKLR 268
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 1.8
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Frame = +1
Query: 574 EEELFAKTDEVKALESRKNKLLEM---LNQQAEE-KGKRAERLENLDQDIKMFXXXXXXX 741
E EL K +V ALE +L E L +Q EE + K + + L + +
Sbjct: 851 ESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQGEKERALDNLQQS 910
Query: 742 XXXXXXXXXXXDAIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKA 921
+ + N +++ D +L ELE + + ++ Q KA
Sbjct: 911 NTSIKTFEEELEKQREHNSILQLANDDLHKSIANLEKELEDTKVSSHAEILALQEQKNKA 970
Query: 922 AKDVQESEEKLKSLRETLMQ 981
D+Q+SE +++ R L Q
Sbjct: 971 LSDLQQSEISIENFRMELEQ 990
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 775 DAIIKENKQVEMLQDQKKSQRDSLIAELERKR---ALRVYDADDIKAQATKAAKDVQESE 945
DA+ +EN + L + ++++ +SL AE+E+ + + + D+K KA KD + +
Sbjct: 172 DALSEENGWKQKLVEDREAKEESLEAEIEKLKQNTEEQAKEISDLKHLLDKAIKDKEATR 231
Query: 946 EKLKS 960
+L S
Sbjct: 232 VELSS 236
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +1
Query: 796 KQVEML-QDQKKSQRDSLIAELER-KRALRVYD--ADDIKAQATKAAKDVQESEEKLKSL 963
+Q E+L QD +K DSL AE+E K +L+ ADD++ K +++ Q +EEK K +
Sbjct: 1503 QQTEVLVQDTEKV--DSLTAEVEELKTSLQSEKQRADDLEK---KRSEEQQANEEKQKKM 1557
Query: 964 RETLMQXXIFEE 999
ET ++ F+E
Sbjct: 1558 EETDVKMRQFQE 1569
>02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004
Length = 403
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +1
Query: 571 FEEELFAK-TDEVKA--LESRKNKLLEMLNQQAEEKGKRAERL 690
+EE L A ++E +A +E+R+ E + ++AEE+G RAERL
Sbjct: 67 WEEALAAAPSEEARAEMVEARRQTRRERVGRRAEERGARAERL 109
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 787 KENKQVEMLQDQKKSQRDSLIAELERKRAL-RVYDADDIKAQATKAAKD 930
+++K+ + + +KK R LIA+ R+R L R D D I + K D
Sbjct: 402 RKSKKYQSVPGEKKKHRKELIAKKRRQRMLGRGVDLDQINTKLRKMVVD 450
>02_05_1225 +
35060642-35060815,35061254-35061802,35062284-35062348,
35062417-35062957,35063321-35064610
Length = 872
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 598 DEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIK 714
D +++ +S KN + +L+ ++E+GK E+ E LDQ I+
Sbjct: 365 DLLESQDSTKNIPIIVLDDDSDERGKEQEKSEVLDQLIQ 403
>04_04_0145 + 23103397-23104308
Length = 303
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 787 KENKQVEMLQDQ---KKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
+E VE L+ + ++ +R++ + ELE++R AD+ A+ + E + +
Sbjct: 191 EEGGSVERLRRRLAAERRRREAALEELEKERRAAASAADEAMAKIACLRNEKALVEREAR 250
Query: 958 SLRETLMQXXIFEELXTXSPIWI 1026
RE Q +++ S W+
Sbjct: 251 QFREMAQQKQMYDRQQIESLQWV 273
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 583 LFAKTDEVKALESRKNKLLEMLNQQAEEK 669
L A DEVK L SR KL EM+ + ++K
Sbjct: 433 LLAYDDEVKELRSRVEKLEEMMKRNRKDK 461
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,777,426
Number of Sequences: 37544
Number of extensions: 404807
Number of successful extensions: 1063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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