Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_G01
(1222 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 35 0.13
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.31
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 33 0.54
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 2.2
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 2.2
U40423-3|AAA81452.1| 327|Caenorhabditis elegans Hypothetical pr... 31 2.2
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 30 2.9
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 30 2.9
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 30 3.8
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 3.8
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 30 3.8
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 30 3.8
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 29 5.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 5.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 5.0
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 6.7
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 6.7
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 6.7
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 6.7
Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical pr... 29 8.8
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 8.8
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 8.8
L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical pr... 29 8.8
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical protein
F23F12.8 protein.
Length = 980
Score = 34.7 bits (76), Expect = 0.13
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Frame = +1
Query: 544 EGRLRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFX 723
E R + EEE + + V+ E + +E+L QQ E++ K+ +LE + +
Sbjct: 454 EARQEQLRVLEEERARELERVRQEELERQHQMEILRQQEEDQKKK--KLEKDREQREQQE 511
Query: 724 XXXXXXXXXXXXXXXXXDAIIKENKQVEMLQDQKKSQRDSL-------IAELERKRALRV 882
+I+E + +ML+ + + +++++ IAE ER++ + +
Sbjct: 512 AEELNRMIIEKEMKENKQKMIEEKNKRKMLEKEMEDRQNAIYEEEERRIAEEERRKQIEI 571
Query: 883 YDADDIKAQ---AT--KAAKDVQESE-EKLKSLRETLMQXXIFE--ELXTXSPI 1020
+ I+ Q AT ++ D E E E L+ ++E+ Q E EL +PI
Sbjct: 572 EERRRIQQQIMIATEERSRLDAMEREREMLRQIKESEKQRKELERQELLATTPI 625
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 33.5 bits (73), Expect = 0.31
Identities = 26/136 (19%), Positives = 60/136 (44%)
Frame = +1
Query: 553 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXX 732
L + ++EL K +E+K + ++ +LLE + E + K A E +++I+ F
Sbjct: 761 LDQMGTIKDELVKKNEEIKTISAKTAQLLE--SNTVESETKLASVTEEREKEIQSFQTQI 818
Query: 733 XXXXXXXXXXXXXXDAIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQA 912
+ + K+ E+ +++ D + +L + + ++D + I+ +
Sbjct: 819 SEKDNEVLTKAERINELETCLKEREVELTGMRTKLDDMTQQLNEETTVVLFD-NSIQEKI 877
Query: 913 TKAAKDVQESEEKLKS 960
+ + E E+LKS
Sbjct: 878 DEKEATINEMNERLKS 893
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 32.7 bits (71), Expect = 0.54
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 796 KQVE-MLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRE 969
K+V+ M+ D KK Q+ +AE+ERKR + + ++ +A K A+ +E + KL+ ++
Sbjct: 928 KRVDSMIADLKKQQKSDELAEIERKRR-ESEEKERLEIEAKKEAERQREIKRKLEEQQQ 985
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 711
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 711
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 711
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352
>U40423-3|AAA81452.1| 327|Caenorhabditis elegans Hypothetical
protein C24H10.2 protein.
Length = 327
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 784 IKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDI 900
+KENK +E + + ++ + E +R +A ++D DDI
Sbjct: 33 MKENKNIEKVSNFRRFNSNQARVEKDRNQASMIFDTDDI 71
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 711
++ E+E KT E K ++ R +L E + + EE + + EN+ QD+
Sbjct: 3358 ELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKEEYAQLIGQAENIKQDL 3408
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 559 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 711
++ E+E KT E K ++ R +L E + + EE + + EN+ QD+
Sbjct: 3358 ELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKEEYAQLIGQAENIKQDL 3408
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 784 IKENKQVEMLQ--DQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAK 927
+KE VE + D+KK + + A +RK V D DD+K + +KA +
Sbjct: 636 MKERSAVENSKKDDKKKKKEEEAAAAKKRKPNETVEDEDDVKPEVSKAKR 685
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 784 IKENKQVEMLQ--DQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAK 927
+KE VE + D+KK + + A +RK V D DD+K + +KA +
Sbjct: 636 MKERSAVENSKKDDKKKKKEEEAAAAKKRKPNETVEDEDDVKPEVSKAKR 685
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 784 IKENKQVEMLQ--DQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAK 927
+KE VE + D+KK + + A +RK V D DD+K + +KA +
Sbjct: 636 MKERSAVENSKKDDKKKKKEEEAAAAKKRKPNETVEDEDDVKPEVSKAKR 685
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 562 IAPFEEELFAKTDEVKALESRKNKLLEM-LNQQAEEKGKR 678
+AP EEE K E + + RK K LEM N++ EEK K+
Sbjct: 1002 LAPTEEEKRKKKQEEEEEKKRKEKELEMKKNKEEEEKLKK 1041
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 784 IKENKQVEMLQ--DQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAK 927
+KE VE + D+KK + + A +RK V D DD+K + +KA +
Sbjct: 636 MKERSAVENSKKDDKKKKKEEEAAAAKKRKPNETVEDEDDVKPEVSKAKR 685
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 796 KQVE-MLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEK 951
K+V+ M+ D KK Q+ +AE+ERKR + + ++ +A K A+ +E + K
Sbjct: 928 KRVDSMIADLKKQQKSDELAEIERKRR-ESEEKERLEIEAKKEAERQREIDGK 979
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 853 ELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRE 969
+LE KR R + DDI+ Q + E ++KLK +++
Sbjct: 440 QLEEKRRRRQEELDDIRRQGEYKRDQILERKKKLKEIKD 478
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +1
Query: 790 ENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRE 969
E++ ++ L + +S +AE + K +R+ DA+DI + ++ + S++KL + R+
Sbjct: 1854 ESRNLQSLNGGMPPRHESRLAEFDVKTNIRL-DAEDIVTMSDESIVAYEASKKKLLASRQ 1912
Query: 970 T 972
T
Sbjct: 1913 T 1913
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +1
Query: 790 ENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRE 969
E++ ++ L + +S +AE + K +R+ DA+DI + ++ + S++KL + R+
Sbjct: 1854 ESRNLQSLNGGMPPRHESRLAEFDVKTNIRL-DAEDIVTMSDESIVAYEASKKKLLASRQ 1912
Query: 970 T 972
T
Sbjct: 1913 T 1913
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 835 RDSLIAELERKRALRVYDADDIKAQATKAAKDVQESE 945
+D L+ +ER L + ++DI + + AKD+ ESE
Sbjct: 571 QDILLETVERANPLHRHGSEDIIVERIEEAKDIHESE 607
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 6.7
Identities = 27/121 (22%), Positives = 51/121 (42%)
Frame = +1
Query: 598 DEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXD 777
D++K LES KNK N Q + K + L+ +Q + +
Sbjct: 786 DKIKTLESMKNK---DKNSQEKRKKELTALLQKAEQTVAQNKNRGEKARREVMLLQATVE 842
Query: 778 AIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
+ K K+ E + +QKK + D L +L A + DA+ + A D++ ++ ++
Sbjct: 843 EMEKTIKKDEGIWEQKKKECDELEEKLPNAIA-ALKDAELEQKAAQAKLNDLKNNQRQIS 901
Query: 958 S 960
+
Sbjct: 902 T 902
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 6.7
Identities = 27/121 (22%), Positives = 51/121 (42%)
Frame = +1
Query: 598 DEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXD 777
D++K LES KNK N Q + K + L+ +Q + +
Sbjct: 786 DKIKTLESMKNK---DKNSQEKRKKELTALLQKAEQTVAQNKNRGEKARREVMLLQATVE 842
Query: 778 AIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
+ K K+ E + +QKK + D L +L A + DA+ + A D++ ++ ++
Sbjct: 843 EMEKTIKKDEGIWEQKKKECDELEEKLPNAIA-ALKDAELEQKAAQAKLNDLKNNQRQIS 901
Query: 958 S 960
+
Sbjct: 902 T 902
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.1 bits (62), Expect = 6.7
Identities = 27/121 (22%), Positives = 51/121 (42%)
Frame = +1
Query: 598 DEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXD 777
D++K LES KNK N Q + K + L+ +Q + +
Sbjct: 786 DKIKTLESMKNK---DKNSQEKRKKELTALLQKAEQTVAQNKNRGEKARREVMLLQATVE 842
Query: 778 AIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
+ K K+ E + +QKK + D L +L A + DA+ + A D++ ++ ++
Sbjct: 843 EMEKTIKKDEGIWEQKKKECDELEEKLPNAIA-ALKDAELEQKAAQAKLNDLKNNQRQIS 901
Query: 958 S 960
+
Sbjct: 902 T 902
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 6.7
Identities = 27/121 (22%), Positives = 51/121 (42%)
Frame = +1
Query: 598 DEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXD 777
D++K LES KNK N Q + K + L+ +Q + +
Sbjct: 786 DKIKTLESMKNK---DKNSQEKRKKELTALLQKAEQTVAQNKNRGEKARREVMLLQATVE 842
Query: 778 AIIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
+ K K+ E + +QKK + D L +L A + DA+ + A D++ ++ ++
Sbjct: 843 EMEKTIKKDEGIWEQKKKECDELEEKLPNAIA-ALKDAELEQKAAQAKLNDLKNNQRQIS 901
Query: 958 S 960
+
Sbjct: 902 T 902
>Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical
protein C05D12.5 protein.
Length = 238
Score = 28.7 bits (61), Expect = 8.8
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +1
Query: 625 KNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXDAIIKENKQV 804
K KLL+MLN + +E + + +E+L + D K +Q
Sbjct: 17 KAKLLKMLNAERKENASKDQLIESLKNQL----ASGGSQKIMEFYRTSVEDLQTKVMRQE 72
Query: 805 EMLQDQKKSQRDSLIAELERKRALRVYD--ADDIKAQATKAAKDVQES-EEKLK 957
++ +Q K+ + +ER ++++V++ ++++ K K ++E+ EE+LK
Sbjct: 73 TIIMEQSKTIE---MLSIERSKSVKVHEDQINEMQEVMDKKVKQLEENYEERLK 123
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/123 (16%), Positives = 52/123 (42%)
Frame = +1
Query: 613 LESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXDAIIKE 792
L+ KN++ + + EK + +ENL + + + D + +E
Sbjct: 87 LQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNI-KTASLQSLMLAKSDSSKTDKLSEE 145
Query: 793 NKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRET 972
N+ +++ + + Q S +++++ K + + D + + +++ EKL + T
Sbjct: 146 NETLKLKVEDLQKQVSSFMSQMQDKNS-EIQKMKDAISVNDVSRQNMDSLSEKLSEMDRT 204
Query: 973 LMQ 981
L +
Sbjct: 205 LRE 207
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/123 (16%), Positives = 52/123 (42%)
Frame = +1
Query: 613 LESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFXXXXXXXXXXXXXXXXXXDAIIKE 792
L+ KN++ + + EK + +ENL + + + D + +E
Sbjct: 87 LQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNI-KTASLQSLMLAKSDSSKTDKLSEE 145
Query: 793 NKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLKSLRET 972
N+ +++ + + Q S +++++ K + + D + + +++ EKL + T
Sbjct: 146 NETLKLKVEDLQKQVSSFMSQMQDKNS-EIQKMKDAISVNDVSRQNMDSLSEKLSEMDRT 204
Query: 973 LMQ 981
L +
Sbjct: 205 LRE 207
>L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical
protein K06H7.3 protein.
Length = 618
Score = 28.7 bits (61), Expect = 8.8
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = +1
Query: 781 IIKENKQVEMLQDQKKSQRDSLIAELERKRALRVYDADDIKAQATKAAKDVQESEEKLK 957
I + K+VE+ ++Q++ Q AE ++++ R + + +K + K +DV+E EE+ K
Sbjct: 506 IPEPKKKVELTEEQEREQ-----AERKKEKKARQKEKEKLKKEIAK--RDVEEMEERQK 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,051,499
Number of Sequences: 27780
Number of extensions: 375705
Number of successful extensions: 1106
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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