Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F23
         (1201 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    28   0.16 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    28   0.16 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   1.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   6.0  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
 Frame = -2

Query: 306 LCQLLFIFFVSLNIYQGQRYDGFE-----VWIMFRSFWISTFALTVSTH-AFFTWRRHSV 145
           L Q +F+ FVS NIY  Q    FE     + +M + +++    + +ST    F      +
Sbjct: 184 LTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHYEVI 243

Query: 144 NLQVCST 124
           N Q   T
Sbjct: 244 NRQTLDT 250


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
 Frame = -2

Query: 306 LCQLLFIFFVSLNIYQGQRYDGFE-----VWIMFRSFWISTFALTVSTH-AFFTWRRHSV 145
           L Q +F+ FVS NIY  Q    FE     + +M + +++    + +ST    F      +
Sbjct: 110 LTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHYEVI 169

Query: 144 NLQVCST 124
           N Q   T
Sbjct: 170 NRQTLDT 176


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 555 LFTCLISIISKYRPVECSIGSTMYIHSNIWGNEMICAYF 439
           LFT  I  I++Y P E   GS +++  ++  + + C +F
Sbjct: 200 LFTSPILAITQYGPEEYVDGSIVFVCFSLVEDTLPCVFF 238


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 327 AIKTSSYLCQLLFIFFV 277
           ++ +SSY C++LF F +
Sbjct: 231 SVSSSSYNCEVLFSFLI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,530
Number of Sequences: 336
Number of extensions: 4318
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)