Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_F23
(1201 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 93 4e-19
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 79 5e-15
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 31 2.1
Z68216-2|CAA92460.2| 367|Caenorhabditis elegans Hypothetical pr... 30 3.7
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 93.1 bits (221), Expect = 4e-19
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Frame = +1
Query: 211 EATEHDPHFEPIVSLP-LVDIQTHEEDEEELAKIRARLYRYDTGDHEWKERGTGDVKLLR 387
E E + F+P++ LP LV+++T EE E+ + R++LY Y EWKERGTG++K+L
Sbjct: 247 EDYEPEGEFKPVIPLPDLVEVKTGEEGEQTMFCNRSKLYIYANETKEWKERGTGELKVLY 306
Query: 388 HKLNNTVRVVMRRDKTLKVCANHFITPDIRMNVHCGSDRAFNWSVFADYADETCKQELLA 567
+K + RVVMRRD+ LKVCAN I + + +++A+ W D++++ L+
Sbjct: 307 NKDKKSWRVVMRRDQVLKVCANFPILGSMTIQQMKSNEKAYTW-FCEDFSEDQPAHVKLS 365
Query: 568 IKFGNPQNAELWKAKFAEA 624
+F N A +K F +A
Sbjct: 366 ARFANVDIAGEFKTLFEKA 384
Score = 79.4 bits (187), Expect = 5e-15
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 202 GDPEATEHDPHFEPIVSLP-LVDIQTHEEDEEELAKIRARLYRYDTGDHEWKERGTGDVK 378
GD E E + F+P++ LP LV+++T EEDEE + R +LY+Y + E KERG GD+K
Sbjct: 716 GDGEY-EPEVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIK 774
Query: 379 LLRHKLNNTVRVVMRRDKTLKVCANHFITPDIRMNVHCGSDRAFNWSVFADYADETCKQE 558
LL+ +N R+VMRR++ K+CAN I ++++ + + D++++ +
Sbjct: 775 LLKSN-DNKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNVLTF-MCQDFSEDASNAD 832
Query: 559 --LLAIKFGNPQNAELWKAKFAEAQ 627
+ KF + A +K +AQ
Sbjct: 833 PAIFTAKFKDEATAGAFKTAVQDAQ 857
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical protein
F59A2.1b protein.
Length = 884
Score = 79.4 bits (187), Expect = 5e-15
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 202 GDPEATEHDPHFEPIVSLP-LVDIQTHEEDEEELAKIRARLYRYDTGDHEWKERGTGDVK 378
GD E E + F+P++ LP LV+++T EEDEE + R +LY+Y + E KERG GD+K
Sbjct: 740 GDGEY-EPEVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIK 798
Query: 379 LLRHKLNNTVRVVMRRDKTLKVCANHFITPDIRMNVHCGSDRAFNWSVFADYADETCKQE 558
LL+ +N R+VMRR++ K+CAN I ++++ + + D++++ +
Sbjct: 799 LLKSN-DNKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNVLTF-MCQDFSEDASNAD 856
Query: 559 --LLAIKFGNPQNAELWKAKFAEAQ 627
+ KF + A +K +AQ
Sbjct: 857 PAIFTAKFKDEATAGAFKTAVQDAQ 881
Score = 70.1 bits (164), Expect = 3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Frame = +1
Query: 211 EATEHDPHFEPIVSLP-LVDIQTHEEDEEELAKIRARLYRYDTGDHEWKERGTGDVKLLR 387
E E + F+P++ LP LV+++T EE E+ + R++LY Y EWKERGTG++K+L
Sbjct: 247 EDYEPEGEFKPVIPLPDLVEVKTGEEGEQTMFCNRSKLYIYANETKEWKERGTGELKVLY 306
Query: 388 HKLNNTVRVVMRRD------------------------KTLKVCANHFITPDIRMNVHCG 495
+K + RVVMRRD + LKVCAN I + +
Sbjct: 307 NKDKKSWRVVMRRDQVTISEETLPSNIENGTEELCWNIQVLKVCANFPILGSMTIQQMKS 366
Query: 496 SDRAFNWSVFADYADETCKQELLAIKFGNPQNAELWKAKFAEA 624
+++A+ W D++++ L+ +F N A +K F +A
Sbjct: 367 NEKAYTW-FCEDFSEDQPAHVKLSARFANVDIAGEFKTLFEKA 408
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 30.7 bits (66), Expect = 2.1
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +1
Query: 394 LNNTVRVVMRRD-----KTLKVCANHFITPDIRMNVHCGSDRAFNWSVFADYADETCKQE 558
L N R+++ RD + L C N ++ P + C + N Y E C
Sbjct: 945 LVNGARLLLARDSISTSEELLECTNVYLMPAFLSRIPC--IESLNNLESLQYGGEPCAPH 1002
Query: 559 LLAIKFGNPQNAELWKAKFAEAQEIVRTKCSLYCQDQSSDDE 684
+L FG QN +W+ Q + + +Y + +S D+
Sbjct: 1003 VLKQIFGAHQNLRVWQEFGLTEQTVYSARQRIYPRSLTSLDD 1044
>Z68216-2|CAA92460.2| 367|Caenorhabditis elegans Hypothetical
protein F27C8.2 protein.
Length = 367
Score = 29.9 bits (64), Expect = 3.7
Identities = 28/124 (22%), Positives = 49/124 (39%)
Frame = +1
Query: 346 EWKERGTGDVKLLRHKLNNTVRVVMRRDKTLKVCANHFITPDIRMNVHCGSDRAFNWSVF 525
+++ G G + L+ L NT +V L N F M G R N S F
Sbjct: 136 DFRHIGIGSI-LMEEILKNTDNIVFNAISYLLPTVNKFNLQQRTMR-KLGRVRVKNSSGF 193
Query: 526 ADYADETCKQELLAIKFGNPQNAELWKAKFAEAQEIVRTKCSLYCQDQSSDDESSITRSE 705
A+ D K+ +++ FG+ + W+ +E + + + SD+ I +
Sbjct: 194 ANLKD---KKSGISLNFGSDNTEDQWERIREFGEECTNERRNWKAFSEKSDENCQIVAAF 250
Query: 706 DTDT 717
D +T
Sbjct: 251 DENT 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,758,240
Number of Sequences: 27780
Number of extensions: 437072
Number of successful extensions: 1531
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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