Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F22
         (1334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.40 
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         27   1.2  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         27   1.2  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         27   1.2  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         27   1.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   1.6  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           25   4.9  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           25   4.9  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    25   4.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 28.7 bits (61), Expect = 0.40
 Identities = 28/139 (20%), Positives = 58/139 (41%)
 Frame = +3

Query: 150  LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 329
            L + ++ + DA D  K +++  ++  K + +   +L K+         +K+       Q+
Sbjct: 1339 LDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKN-------QV 1391

Query: 330  NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 509
               ++  + AL       ++ +  SR  ++R  E L  A     +NA   R+  Q A   
Sbjct: 1392 EESSRRAEEALNLVPNIERQIVN-SRDLLQRAEEALYAA----SRNAEDARKNAQTAQDK 1446

Query: 510  TVQESQKLAKKVSSNVQET 566
              +E+ KLA+ +      T
Sbjct: 1447 YAEEASKLAENIKKRANAT 1465



 Score = 27.1 bits (57), Expect = 1.2
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 366  DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 545
            +A+ KA EAL+++     + A   ++    +       REKL     NTV    KL ++ 
Sbjct: 1214 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKL-----NTV---SKLTEQA 1265

Query: 546  SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 659
             +  +E N++      A       N    I KI++ AN
Sbjct: 1266 LTRAREVNDEALTLFAAVNRTAPPNID--IDKIKKEAN 1301



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 357  ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 536
            AL  A+  A++A + ++   ++ AEE  K   +++K A A +   +       Q + +LA
Sbjct: 1425 ALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLA 1484

Query: 537  K 539
            K
Sbjct: 1485 K 1485


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 545
           +A+ KA EAL+++     + A   ++    +       REKL     NTV    KL ++ 
Sbjct: 75  EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKL-----NTV---SKLTEQA 126

Query: 546 SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 659
            +  +E N++      A       N    I KI++ AN
Sbjct: 127 LTRAREVNDEALTLFAAVNRTAPPNID--IDKIKKEAN 162


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 545
           +A+ KA EAL+++     + A   ++    +       REKL     NTV    KL ++ 
Sbjct: 75  EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKL-----NTV---SKLTEQA 126

Query: 546 SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 659
            +  +E N++      A       N    I KI++ AN
Sbjct: 127 LTRAREVNDEALTLFAAVNRTAPPNID--IDKIKKEAN 162


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 545
           +A+ KA EAL+++     + A   ++    +       REKL     NTV    KL ++ 
Sbjct: 75  EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKL-----NTV---SKLTEQA 126

Query: 546 SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 659
            +  +E N++      A       N    I KI++ AN
Sbjct: 127 LTRAREVNDEALTLFAAVNRTAPPNID--IDKIKKEAN 162


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 545
           +A+ KA EAL+++     + A   ++    +       REKL     NTV    KL ++ 
Sbjct: 75  EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKL-----NTV---SKLTEQA 126

Query: 546 SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 659
            +  +E N++      A       N    I KI++ AN
Sbjct: 127 LTRAREVNDEALTLFAAVNRTAPPNID--IDKIKKEAN 162


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 15/97 (15%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
 Frame = +3

Query: 384  KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA---KKVSSN 554
            KE  +++ + +++  +   K   +V + A  L E+ +   +  ++  + +    KK+ + 
Sbjct: 957  KEDPQEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAI 1016

Query: 555  VQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAK 665
            + + +E+   K+K A+ +  +N   +   +     A+
Sbjct: 1017 ITDLDEEKKKKLKVAWSEVDENFGSIFSTLLPGTQAR 1053


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 378 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 533
           +AK  LEQ ++ ++      R+AH   E + T  +   Q  +QN  +E   L
Sbjct: 382 QAKITLEQKKKALDEQVSNGRRAH--AELDGTLKQAVGQIELQNATEEQSPL 431


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 378 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 533
           +AK  LEQ ++ ++      R+AH   E + T  +   Q  +QN  +E   L
Sbjct: 382 QAKITLEQKKKALDEQVSNGRRAH--AELDGTLKQAVGQIELQNATEEQSPL 431


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 441 KAHPDVEKNATALREKLQAAVQ-NTVQESQKLAKKVSSNV 557
           KAHPD++++   L  K    +   T+Q  Q +    SS+V
Sbjct: 350 KAHPDLQQSVDDLMAKFNTPIDGKTLQYFQNIGISPSSSV 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,134
Number of Sequences: 2352
Number of extensions: 9284
Number of successful extensions: 121
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 153210915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)