Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F20
         (1321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.70 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   2.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.70
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = -1

Query: 1003 PPXGGGXPPPXXXKXPGGGXXXPPPXPXGGGGGXFXXXXXXXKXXXGGFFWGG 845
            P  GGG          GG    P P   GGGGG         +   GG   GG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 918  PXGXGGGXXXPPPGXXXXXGGGXPPPXGGG 1007
            P   GGG     PG      GG  P  GGG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 25.4 bits (53), Expect = 3.7
 Identities = 13/49 (26%), Positives = 17/49 (34%)
 Frame = +3

Query: 954  PGXXXXXGGGXPPPXGGGXKXPPPXXXXGGXXXKXXXXXPRXKKKXXRG 1100
            PG      GG  P  GGG    P     GG   +      R +++   G
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGG 248



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +3

Query: 915  PPXGXGGGXXXPPPGXXXXXGGGXPPPXGGG 1007
            P  G GG     P G     GG  P   GGG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
            chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = -2

Query: 1020 GVFXPXPPXGGGXPPPXXXXPPGGXGXXPPXXPXGGGG 907
            G+  P    GGG   P    P G  G   P  P G  G
Sbjct: 395  GIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG 432


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
 Frame = -2

Query: 1008 PXPPXGGGXPPPXXXXPPGGXGXXPPXXP--XGGGG 907
            P PP  G  P P    P GG     P  P   G GG
Sbjct: 586  PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,443
Number of Sequences: 2352
Number of extensions: 15514
Number of successful extensions: 60
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152462631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)