Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F19
         (1285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.92 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   2.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.9  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 0.92
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 315 CPCTHSSSVQTPSTSGILCLEEKQQPEL 232
           C CTH   +   +   I+ ++E QQP L
Sbjct: 566 CMCTHKVDIPLNAIVEIVLVDEVQQPNL 593


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 339 SRTRIMHKNLKAKEEGQCSNGSCKI 413
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/45 (20%), Positives = 21/45 (46%)
 Frame = +2

Query: 656 VLNLMLVYYCLV*FLFSTNLYFQIFIFLFPYFLTNFIYPFFKFLH 790
           +  + L++YC++  L     ++  FI    + L      +F ++H
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMH 265



 Score = 23.8 bits (49), Expect = 2.8
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 665 LMLVYYCLV*FL-FSTNLYFQIFIFLF--PYFLTNFIYPFF 778
           L+ VYY    F+ F+ +L F + I+ F  P F    IY F+
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 315 CPCTHSSSVQTPSTSGILCLEEKQQPEL 232
           C CTH   +   +   ++ ++E Q P L
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNL 593


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,991
Number of Sequences: 336
Number of extensions: 4481
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37816048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)