Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F19
         (1285 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    35   0.004
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    30   0.13 
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    30   0.13 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    30   0.17 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              29   0.29 
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    28   0.51 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    28   0.67 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    28   0.67 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.89 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    27   1.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   1.6  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   1.6  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    27   1.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   3.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   4.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   4.8  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   4.8  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   6.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 35.1 bits (77), Expect = 0.004
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +3

Query: 261 IRCQKCLEFGHWSYECK 311
           +RC +CLE GHW+++C+
Sbjct: 660 VRCYRCLELGHWAHDCR 676



 Score = 27.1 bits (57), Expect = 1.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 308 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 427
           Q Q Q       +T       SQR+R +QQ Q Q  QQ++
Sbjct: 408 QQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQ 447



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 362 ESESQRRRSMQQWQLQDTQQEK 427
           + + Q ++  QQWQ Q  QQ++
Sbjct: 357 QQQQQHQQQQQQWQQQQQQQQQ 378


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCS 395
           +C +C E+GH +  C GK        R+   H+  + K EG C+
Sbjct: 213 QCYRCYEYGHTAARCHGK-------DRSSKCHRCAEDKHEGPCT 249


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECKG 314
           RC KC E GH+S +CKG
Sbjct: 417 RCFKCWETGHFSRDCKG 433


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 29.9 bits (64), Expect = 0.17
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 252 PQGIRCQKCLEFGHWSYECKG---KRKILVRPSRTRIMHKNLKAKEEGQCS 395
           P+  RC +CLE GH +  C+    ++ + +R   T   HK    + E +C+
Sbjct: 503 PERQRCFRCLEMGHIASNCRSTADRQNLCIRCGLTG--HKARSCQNEAKCA 551


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 0.29
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 261 IRCQKCLEFGHWSYECKG---KRKILVRPSRTRIMHKNLKAKEEGQCSNGSCKIPN 419
           +RC +CLE GH + +C+    ++ + +R  +    HK     EE +C  G C  P+
Sbjct: 549 LRCYRCLEHGHNARDCRSPVDRQNVCIRCGQEG--HKAGTCMEEIRC--GKCDGPH 600


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQC 392
           RC +CLE GH   EC+G  +  +        HK +    + +C
Sbjct: 235 RCFRCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKC 277


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 0.67
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 261 IRCQKCLEFGHWSYECKGK 317
           +RC +CLE GH + +C G+
Sbjct: 289 VRCFRCLERGHTTADCAGE 307


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 0.67
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 252 PQGIRCQKCLEFGHWSYECK 311
           P+  RC +CLE GH ++ C+
Sbjct: 472 PERQRCYRCLERGHLAHACR 491


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 261 IRCQKCLEFGHWSYECKGK 317
           ++C KC + GH  +EC G+
Sbjct: 328 VKCFKCWKLGHKGFECTGQ 346


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHK-NLKAKEEGQCSN 398
           +C KC + GH SY C+        P R+ +  K  L   ++  C+N
Sbjct: 276 KCYKCWKVGHTSYHCR-------EPDRSNLCWKCGLSGHKKQACTN 314


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 725 IFIFLFPYFLTNFIYPFFKF 784
           IF+FL  + L +F +PFF F
Sbjct: 56  IFMFLLHFVLFSFSFPFFSF 75



 Score = 24.2 bits (50), Expect = 8.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 695 FLFSTNLYFQIFIFLFPYF 751
           F+F   L+F +F F FP+F
Sbjct: 55  FIFMFLLHFVLFSFSFPFF 73


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECK 311
           RC +CLE GH + EC+
Sbjct: 363 RCYRCLERGHIARECR 378


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 261 IRCQKCLEFGHWSYEC 308
           +RC +CLE GH S +C
Sbjct: 404 LRCYRCLERGHVSRDC 419


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECK 311
           RC +CLE GH + +C+
Sbjct: 389 RCYRCLERGHLARDCQ 404


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 315 CPCTHSSSVQTPSTSGILCLEEKQQPEL 232
           C CTH   +   +   ++ ++E QQP L
Sbjct: 608 CMCTHKVDIPLNAIVEVVLVDEVQQPNL 635


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 252  EKQQPELLAFSSQPDACYMFPESYSESQR 166
            E+QQ    A ++QPD     PE  +E++R
Sbjct: 1019 EEQQTLAAAEAAQPDPASSLPEDMAEAER 1047


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 RCQKCLEFGHWSYECKGK 317
           RC +CLE GH +  C G+
Sbjct: 465 RCFRCLERGHIAATCTGE 482


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 558 SLNQTRSPIHCCCHYQTSSNPPM 490
           S  + R PI CCC    SSN PM
Sbjct: 539 SCYRNRMPI-CCCFCCASSNGPM 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,268
Number of Sequences: 2352
Number of extensions: 18389
Number of successful extensions: 54
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)