Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_F19
         (1285 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071154-1|AAL48776.1|  176|Drosophila melanogaster RE18415p pro...    75   2e-13
AE014297-2125|AAF55257.1|  176|Drosophila melanogaster CG5516-PA...    75   2e-13
M14954-1|AAA70221.1|  426|Drosophila melanogaster putative ORF1 ...    33   0.64 
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    30   5.9  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    30   5.9  
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    30   5.9  
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    30   5.9  

>AY071154-1|AAL48776.1|  176|Drosophila melanogaster RE18415p
           protein.
          Length = 176

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 183 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMH 359
           MTL G   R  A++K+       FP GIRCQKCL+ GHWSYECK KRK + R SRT+ + 
Sbjct: 1   MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHRSSRTKQLS 60

Query: 360 KNLKAKE 380
           K +  KE
Sbjct: 61  KRMSQKE 67


>AE014297-2125|AAF55257.1|  176|Drosophila melanogaster CG5516-PA
           protein.
          Length = 176

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 183 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMH 359
           MTL G   R  A++K+       FP GIRCQKCL+ GHWSYECK KRK + R SRT+ + 
Sbjct: 1   MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHRSSRTKQLS 60

Query: 360 KNLKAKE 380
           K +  KE
Sbjct: 61  KRMSQKE 67


>M14954-1|AAA70221.1|  426|Drosophila melanogaster putative ORF1
           protein.
          Length = 426

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 252 PQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCSN 398
           P  +RC+KCL FGH +  CK   +  +  S T+  +   K   E  C N
Sbjct: 183 PLPLRCKKCLRFGHPTPICKSV-ETCINCSETKHTNDGEKCTNEKNCLN 230


>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
           protein.
          Length = 1823

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 308 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 427
           Q Q Q  SSS  Y N+   S  Q+++S QQ Q Q   Q++
Sbjct: 723 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 308 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 427
           Q Q Q  SSS  Y N+   S  Q+++S QQ Q Q   Q++
Sbjct: 574 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 613


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
           isoform B protein.
          Length = 1818

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 308 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 427
           Q Q Q  SSS  Y N+   S  Q+++S QQ Q Q   Q++
Sbjct: 718 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 757


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
           isoform A protein.
          Length = 1823

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 308 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 427
           Q Q Q  SSS  Y N+   S  Q+++S QQ Q Q   Q++
Sbjct: 723 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,536,030
Number of Sequences: 53049
Number of extensions: 751234
Number of successful extensions: 2121
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6926855700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)